Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC13.28□□□□□ -0.28
Smarcc1P97496 AC161877.1-201ENSMUST00000227736 699 ntBASIC13.28□□□□□ -0.28
Smarcc1P97496 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcc1P97496 Gm25483-201ENSMUST00000083224 227 ntBASIC13.28□□□□□ -0.28
Smarcc1P97496 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Smarcc1P97496 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcc1P97496 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcc1P97496 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Smarcc1P97496 AC158777.1-201ENSMUST00000226216 1724 ntBASIC13.27□□□□□ -0.28
Smarcc1P97496 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcc1P97496 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcc1P97496 Gm26684-202ENSMUST00000228229 8257 ntBASIC13.27□□□□□ -0.28
Smarcc1P97496 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcc1P97496 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcc1P97496 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcc1P97496 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcc1P97496 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.27□□□□□ -0.29
Smarcc1P97496 Gm23129-201ENSMUST00000104259 132 ntBASIC13.27□□□□□ -0.29
Smarcc1P97496 Use1-203ENSMUST00000110054 973 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcc1P97496 Gm13326-201ENSMUST00000118730 1011 ntBASIC13.27□□□□□ -0.29
Smarcc1P97496 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcc1P97496 Gm15650-201ENSMUST00000135451 770 ntTSL 3 BASIC13.27□□□□□ -0.29
Smarcc1P97496 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcc1P97496 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC13.27□□□□□ -0.29
Smarcc1P97496 Gm23479-201ENSMUST00000158876 122 ntBASIC13.27□□□□□ -0.29
Smarcc1P97496 1700028K03Rik-202ENSMUST00000159902 742 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Smarcc1P97496 Mir6934-201ENSMUST00000183965 62 ntBASIC13.27□□□□□ -0.29
Smarcc1P97496 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcc1P97496 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcc1P97496 Gm42588-201ENSMUST00000200538 1297 ntBASIC13.27□□□□□ -0.29
Smarcc1P97496 Gm5881-201ENSMUST00000204737 367 ntBASIC13.27□□□□□ -0.29
Smarcc1P97496 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC13.27□□□□□ -0.29
Smarcc1P97496 Gm8768-201ENSMUST00000220020 826 ntBASIC13.27□□□□□ -0.29
Smarcc1P97496 Gm18749-201ENSMUST00000222410 692 ntBASIC13.27□□□□□ -0.29
Smarcc1P97496 Cxcl3-201ENSMUST00000031326 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcc1P97496 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Smarcc1P97496 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcc1P97496 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.27□□□□□ -0.29
Smarcc1P97496 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcc1P97496 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcc1P97496 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcc1P97496 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcc1P97496 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.27□□□□□ -0.29
Smarcc1P97496 Dcstamp-201ENSMUST00000022913 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcc1P97496 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcc1P97496 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcc1P97496 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC13.27□□□□□ -0.29
Smarcc1P97496 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcc1P97496 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc1P97496 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Smarcc1P97496 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc1P97496 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc1P97496 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc1P97496 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Smarcc1P97496 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc1P97496 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc1P97496 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc1P97496 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc1P97496 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC13.26□□□□□ -0.29
Smarcc1P97496 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc1P97496 Gm11771-201ENSMUST00000118124 732 ntBASIC13.26□□□□□ -0.29
Smarcc1P97496 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc1P97496 Gm13002-201ENSMUST00000119286 682 ntBASIC13.26□□□□□ -0.29
Smarcc1P97496 Gm11701-201ENSMUST00000121277 1142 ntBASIC13.26□□□□□ -0.29
Smarcc1P97496 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Smarcc1P97496 Gm1758-201ENSMUST00000164528 606 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Smarcc1P97496 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC13.26□□□□□ -0.29
Smarcc1P97496 Gm9117-201ENSMUST00000177735 1098 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Smarcc1P97496 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC13.26□□□□□ -0.29
Smarcc1P97496 Pfkfb3-215ENSMUST00000183869 1478 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc1P97496 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC13.26□□□□□ -0.29
Smarcc1P97496 Gm8918-201ENSMUST00000190587 1087 ntBASIC13.26□□□□□ -0.29
Smarcc1P97496 Gm19058-201ENSMUST00000192135 598 ntBASIC13.26□□□□□ -0.29
Smarcc1P97496 Gm37444-201ENSMUST00000193605 439 ntBASIC13.26□□□□□ -0.29
Smarcc1P97496 Gm44460-201ENSMUST00000196179 129 ntBASIC13.26□□□□□ -0.29
Smarcc1P97496 Gm30652-201ENSMUST00000199103 430 ntBASIC13.26□□□□□ -0.29
Smarcc1P97496 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc1P97496 Gm44664-201ENSMUST00000206841 1786 ntBASIC13.26□□□□□ -0.29
Smarcc1P97496 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc1P97496 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC13.26□□□□□ -0.29
Smarcc1P97496 Gm35850-202ENSMUST00000211705 2120 ntBASIC13.26□□□□□ -0.29
Smarcc1P97496 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc1P97496 CT025547.1-201ENSMUST00000225127 578 ntBASIC13.26□□□□□ -0.29
Smarcc1P97496 AC130671.3-201ENSMUST00000227393 1897 ntBASIC13.26□□□□□ -0.29
Smarcc1P97496 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc1P97496 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc1P97496 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc1P97496 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc1P97496 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc1P97496 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Smarcc1P97496 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc1P97496 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc1P97496 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc1P97496 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc1P97496 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc1P97496 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc1P97496 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc1P97496 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc1P97496 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc1P97496 AC149588.2-201ENSMUST00000228182 1859 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms