Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Fv4P11370 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Fv4P11370 Gm7061-201ENSMUST00000118127 1416 ntBASIC10.18□□□□□ -0.78
Fv4P11370 Zfp317-205ENSMUST00000215372 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Fv4P11370 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Fv4P11370 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Fv4P11370 4932442E05Rik-201ENSMUST00000191892 2717 ntBASIC10.18□□□□□ -0.78
Fv4P11370 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Fv4P11370 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Fv4P11370 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Fv4P11370 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Fv4P11370 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Fv4P11370 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC10.18□□□□□ -0.78
Fv4P11370 Ighv13-1-201ENSMUST00000103480 294 ntBASIC10.18□□□□□ -0.78
Fv4P11370 Gm14231-201ENSMUST00000120090 592 ntBASIC10.18□□□□□ -0.78
Fv4P11370 Gm12950-201ENSMUST00000121683 417 ntBASIC10.18□□□□□ -0.78
Fv4P11370 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC10.18□□□□□ -0.78
Fv4P11370 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC10.18□□□□□ -0.78
Fv4P11370 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Fv4P11370 Mir1943-201ENSMUST00000158276 73 ntBASIC10.18□□□□□ -0.78
Fv4P11370 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC10.18□□□□□ -0.78
Fv4P11370 Mir5132-201ENSMUST00000175166 71 ntBASIC10.18□□□□□ -0.78
Fv4P11370 Gm19459-201ENSMUST00000176240 835 ntBASIC10.18□□□□□ -0.78
Fv4P11370 Gm26976-201ENSMUST00000182929 908 ntBASIC10.18□□□□□ -0.78
Fv4P11370 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Fv4P11370 Gm3017-201ENSMUST00000203603 1126 ntBASIC10.18□□□□□ -0.78
Fv4P11370 Gm45594-201ENSMUST00000211717 241 ntBASIC10.18□□□□□ -0.78
Fv4P11370 Gm45770-201ENSMUST00000212105 616 ntBASIC10.18□□□□□ -0.78
Fv4P11370 AC135469.1-201ENSMUST00000225984 772 ntBASIC10.18□□□□□ -0.78
Fv4P11370 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC10.18□□□□□ -0.78
Fv4P11370 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC10.18□□□□□ -0.78
Fv4P11370 Tnfaip8-212ENSMUST00000179937 2385 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Fv4P11370 H2-T3-204ENSMUST00000102675 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Fv4P11370 Smok3a-202ENSMUST00000171498 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Fv4P11370 Clgn-201ENSMUST00000002259 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Fv4P11370 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Fv4P11370 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Fv4P11370 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Fv4P11370 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Fv4P11370 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Fv4P11370 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Fv4P11370 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Fv4P11370 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC10.18□□□□□ -0.78
Fv4P11370 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC10.18□□□□□ -0.78
Fv4P11370 Zfp948-201ENSMUST00000088787 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Fv4P11370 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Fv4P11370 Timm9-208ENSMUST00000221797 2564 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Fv4P11370 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Fv4P11370 Tnfrsf9-204ENSMUST00000105672 1999 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Fv4P11370 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Fv4P11370 Gm10093-201ENSMUST00000079363 1977 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Fv4P11370 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Fv4P11370 Creb3l4-202ENSMUST00000107369 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Fv4P11370 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Fv4P11370 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Fv4P11370 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Fv4P11370 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Fv4P11370 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC10.17□□□□□ -0.78
Fv4P11370 Gm19557-201ENSMUST00000182109 2765 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Fv4P11370 Fcgr3-204ENSMUST00000169017 1324 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Fv4P11370 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Fv4P11370 Zfp354a-201ENSMUST00000020628 1719 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Fv4P11370 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Fv4P11370 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Fv4P11370 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC10.17□□□□□ -0.78
Fv4P11370 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Fv4P11370 Gm11892-201ENSMUST00000117711 1202 ntBASIC10.17□□□□□ -0.78
Fv4P11370 Gm5764-201ENSMUST00000118817 885 ntBASIC10.17□□□□□ -0.78
Fv4P11370 Gm15131-201ENSMUST00000119124 595 ntBASIC10.17□□□□□ -0.78
Fv4P11370 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Fv4P11370 Gm12176-201ENSMUST00000121420 875 ntBASIC10.17□□□□□ -0.78
Fv4P11370 Gm14006-201ENSMUST00000122132 981 ntBASIC10.17□□□□□ -0.78
Fv4P11370 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC10.17□□□□□ -0.78
Fv4P11370 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC10.17□□□□□ -0.78
Fv4P11370 Gm15744-201ENSMUST00000161734 213 ntBASIC10.17□□□□□ -0.78
Fv4P11370 Gm9574-201ENSMUST00000173127 845 ntBASIC10.17□□□□□ -0.78
Fv4P11370 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC10.17□□□□□ -0.78
Fv4P11370 Gm45258-201ENSMUST00000210042 853 ntBASIC10.17□□□□□ -0.78
Fv4P11370 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC10.17□□□□□ -0.78
Fv4P11370 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Fv4P11370 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC10.17□□□□□ -0.78
Fv4P11370 AC159376.1-201ENSMUST00000218504 630 ntBASIC10.17□□□□□ -0.78
Fv4P11370 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC10.17□□□□□ -0.78
Fv4P11370 Nsd1-205ENSMUST00000224693 852 ntBASIC10.17□□□□□ -0.78
Fv4P11370 Capsl-202ENSMUST00000226688 739 ntBASIC10.17□□□□□ -0.78
Fv4P11370 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Fv4P11370 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Fv4P11370 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Fv4P11370 Mirlet7i-201ENSMUST00000083472 85 ntBASIC10.17□□□□□ -0.78
Fv4P11370 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Fv4P11370 CT009713.5-203ENSMUST00000224218 2079 ntBASIC10.17□□□□□ -0.78
Fv4P11370 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Fv4P11370 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Fv4P11370 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Fv4P11370 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Fv4P11370 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Fv4P11370 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Fv4P11370 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC10.17□□□□□ -0.78
Fv4P11370 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC10.17□□□□□ -0.78
Fv4P11370 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms