Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Hoxb3P09026 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Gm10020-201ENSMUST00000081993 612 ntBASIC10.97□□□□□ -0.65
Hoxb3P09026 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Hoxb3P09026 Gm45172-201ENSMUST00000206054 1301 ntBASIC10.97□□□□□ -0.65
Hoxb3P09026 Dpep2-202ENSMUST00000117555 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.97□□□□□ -0.65
Hoxb3P09026 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Gm44106-201ENSMUST00000203153 1599 ntBASIC10.97□□□□□ -0.65
Hoxb3P09026 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.97□□□□□ -0.65
Hoxb3P09026 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Hoxb3P09026 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.97□□□□□ -0.65
Hoxb3P09026 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Hoxb3P09026 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxb3P09026 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxb3P09026 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxb3P09026 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Hoxb3P09026 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.96□□□□□ -0.65
Hoxb3P09026 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxb3P09026 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxb3P09026 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.96□□□□□ -0.65
Hoxb3P09026 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxb3P09026 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxb3P09026 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxb3P09026 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxb3P09026 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxb3P09026 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxb3P09026 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxb3P09026 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxb3P09026 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxb3P09026 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxb3P09026 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Hoxb3P09026 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxb3P09026 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxb3P09026 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Hoxb3P09026 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC10.96□□□□□ -0.65
Hoxb3P09026 Gm43981-201ENSMUST00000203285 1467 ntBASIC10.96□□□□□ -0.65
Hoxb3P09026 Gm5822-201ENSMUST00000161562 1378 ntBASIC10.96□□□□□ -0.65
Hoxb3P09026 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC10.96□□□□□ -0.65
Hoxb3P09026 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC10.96□□□□□ -0.65
Hoxb3P09026 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxb3P09026 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxb3P09026 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxb3P09026 Gm14398-201ENSMUST00000117287 1073 ntBASIC10.96□□□□□ -0.65
Hoxb3P09026 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Hoxb3P09026 Gm12748-201ENSMUST00000120763 504 ntBASIC10.96□□□□□ -0.65
Hoxb3P09026 Gm25102-201ENSMUST00000122479 112 ntBASIC10.96□□□□□ -0.65
Hoxb3P09026 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC10.96□□□□□ -0.65
Hoxb3P09026 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxb3P09026 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
Hoxb3P09026 Gm2541-201ENSMUST00000161209 711 ntBASIC10.96□□□□□ -0.65
Hoxb3P09026 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Hoxb3P09026 Gm6970-201ENSMUST00000169692 666 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Hoxb3P09026 Gm22662-201ENSMUST00000175290 256 ntBASIC10.96□□□□□ -0.65
Hoxb3P09026 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Hoxb3P09026 Gm12424-201ENSMUST00000179673 447 ntBASIC10.96□□□□□ -0.65
Hoxb3P09026 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC10.96□□□□□ -0.65
Hoxb3P09026 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC10.96□□□□□ -0.65
Hoxb3P09026 Gm7891-201ENSMUST00000190284 843 ntBASIC10.96□□□□□ -0.65
Hoxb3P09026 Gm19086-201ENSMUST00000190772 665 ntBASIC10.96□□□□□ -0.65
Hoxb3P09026 Gm37932-201ENSMUST00000192258 1167 ntBASIC10.96□□□□□ -0.65
Hoxb3P09026 Gm37154-201ENSMUST00000192266 1290 ntBASIC10.96□□□□□ -0.65
Hoxb3P09026 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC10.96□□□□□ -0.65
Hoxb3P09026 Gm44173-201ENSMUST00000204316 132 ntBASIC10.96□□□□□ -0.65
Hoxb3P09026 Gm44636-201ENSMUST00000206130 755 ntBASIC10.96□□□□□ -0.65
Hoxb3P09026 Gm7344-201ENSMUST00000212122 1222 ntBASIC10.96□□□□□ -0.65
Hoxb3P09026 AC192616.3-201ENSMUST00000220797 1124 ntBASIC10.96□□□□□ -0.65
Hoxb3P09026 Capsl-202ENSMUST00000226688 739 ntBASIC10.96□□□□□ -0.65
Hoxb3P09026 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Hoxb3P09026 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxb3P09026 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxb3P09026 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC10.96□□□□□ -0.65
Hoxb3P09026 Olfr1115-201ENSMUST00000081986 1102 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Hoxb3P09026 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Hoxb3P09026 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC10.96□□□□□ -0.65
Hoxb3P09026 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hoxb3P09026 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.96□□□□□ -0.66
Hoxb3P09026 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.96□□□□□ -0.66
Hoxb3P09026 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Hoxb3P09026 Gm38348-201ENSMUST00000191718 2273 ntBASIC10.96□□□□□ -0.66
Hoxb3P09026 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hoxb3P09026 AC022682.1-201ENSMUST00000224624 2023 ntBASIC10.96□□□□□ -0.66
Hoxb3P09026 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms