Protein–RNA interactions for Protein: F8VPU6

Usp9y, Ubiquitin-specific peptidase 9, Y chromosome, mousemouse

Predictions only

Length 2,556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9yF8VPU6 Gm8577-201ENSMUST00000122420 986 ntBASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Vmn2r-ps31-201ENSMUST00000176474 760 ntBASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Gm18749-201ENSMUST00000222410 692 ntBASIC8.44□□□□□ -1.06
Usp9yF8VPU6 AC154687.1-201ENSMUST00000224875 677 ntBASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Churc1-201ENSMUST00000041262 676 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Mir25-201ENSMUST00000083460 84 ntBASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Tatdn3-202ENSMUST00000085633 1089 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Gm42974-201ENSMUST00000199556 2654 ntBASIC8.44□□□□□ -1.06
Usp9yF8VPU6 AC187103.1-202ENSMUST00000223904 1536 ntBASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 4930455D15Rik-201ENSMUST00000181632 1616 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Plec-217ENSMUST00000169438 14827 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Ntrk2-208ENSMUST00000225583 2719 ntBASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Gm11621-201ENSMUST00000118253 589 ntBASIC8.43□□□□□ -1.06
Usp9yF8VPU6 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Gm24368-201ENSMUST00000175388 106 ntBASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Gm28032-201ENSMUST00000184104 96 ntBASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 AC161172.1-201ENSMUST00000227801 486 ntBASIC8.43□□□□□ -1.06
Usp9yF8VPU6 AC161581.1-201ENSMUST00000228696 318 ntBASIC8.43□□□□□ -1.06
Usp9yF8VPU6 1110017D15Rik-202ENSMUST00000095126 884 ntTSL 3 BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Gm4865-201ENSMUST00000196284 1309 ntBASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Gm32540-201ENSMUST00000207174 1872 ntTSL 5 BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Gm15363-201ENSMUST00000118897 631 ntBASIC8.43□□□□□ -1.06
Usp9yF8VPU6 4930538E20Rik-201ENSMUST00000131383 546 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Mir7058-201ENSMUST00000184637 75 ntBASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Gm29471-201ENSMUST00000190527 700 ntBASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Gm42915-201ENSMUST00000197478 323 ntBASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Gm16475-202ENSMUST00000209033 528 ntBASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Gm34597-201ENSMUST00000211189 633 ntTSL 5 BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Mup2-201ENSMUST00000074700 927 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Mup7-201ENSMUST00000079697 927 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Mup19-201ENSMUST00000080606 927 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 9630028H03Rik-202ENSMUST00000153402 1559 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Gm43375-201ENSMUST00000196705 2480 ntBASIC8.43□□□□□ -1.06
Usp9yF8VPU6 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp9yF8VPU6 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp9yF8VPU6 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp9yF8VPU6 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp9yF8VPU6 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp9yF8VPU6 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp9yF8VPU6 Sncaip-201ENSMUST00000025413 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp9yF8VPU6 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp9yF8VPU6 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp9yF8VPU6 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp9yF8VPU6 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Usp9yF8VPU6 Scgb1b30-201ENSMUST00000108083 491 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms