Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcb1Q9Z0H3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcb1Q9Z0H3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcb1Q9Z0H3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcb1Q9Z0H3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Smarcb1Q9Z0H3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.73■□□□□ 0.91
Smarcb1Q9Z0H3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcb1Q9Z0H3 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.73■□□□□ 0.91
Smarcb1Q9Z0H3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Smarcb1Q9Z0H3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.73■□□□□ 0.91
Smarcb1Q9Z0H3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcb1Q9Z0H3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcb1Q9Z0H3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcb1Q9Z0H3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcb1Q9Z0H3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcb1Q9Z0H3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcb1Q9Z0H3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcb1Q9Z0H3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcb1Q9Z0H3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.72■□□□□ 0.91
Smarcb1Q9Z0H3 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.72■□□□□ 0.91
Smarcb1Q9Z0H3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcb1Q9Z0H3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcb1Q9Z0H3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Smarcb1Q9Z0H3 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.72■□□□□ 0.91
Smarcb1Q9Z0H3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.71■□□□□ 0.91
Smarcb1Q9Z0H3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcb1Q9Z0H3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Smarcb1Q9Z0H3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcb1Q9Z0H3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcb1Q9Z0H3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcb1Q9Z0H3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcb1Q9Z0H3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcb1Q9Z0H3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcb1Q9Z0H3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcb1Q9Z0H3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcb1Q9Z0H3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcb1Q9Z0H3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
Smarcb1Q9Z0H3 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.69■□□□□ 0.9
Smarcb1Q9Z0H3 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.69■□□□□ 0.9
Smarcb1Q9Z0H3 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.69■□□□□ 0.9
Smarcb1Q9Z0H3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcb1Q9Z0H3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcb1Q9Z0H3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcb1Q9Z0H3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Smarcb1Q9Z0H3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcb1Q9Z0H3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcb1Q9Z0H3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcb1Q9Z0H3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcb1Q9Z0H3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Smarcb1Q9Z0H3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.68■□□□□ 0.9
Smarcb1Q9Z0H3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.68■□□□□ 0.9
Smarcb1Q9Z0H3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.68■□□□□ 0.9
Smarcb1Q9Z0H3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.68■□□□□ 0.9
Smarcb1Q9Z0H3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Smarcb1Q9Z0H3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcb1Q9Z0H3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Smarcb1Q9Z0H3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcb1Q9Z0H3 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.67■□□□□ 0.9
Smarcb1Q9Z0H3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcb1Q9Z0H3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.67■□□□□ 0.9
Smarcb1Q9Z0H3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
Smarcb1Q9Z0H3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcb1Q9Z0H3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcb1Q9Z0H3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcb1Q9Z0H3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcb1Q9Z0H3 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.67■□□□□ 0.9
Smarcb1Q9Z0H3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcb1Q9Z0H3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.66■□□□□ 0.9
Smarcb1Q9Z0H3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Smarcb1Q9Z0H3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Smarcb1Q9Z0H3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcb1Q9Z0H3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcb1Q9Z0H3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcb1Q9Z0H3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcb1Q9Z0H3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Smarcb1Q9Z0H3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcb1Q9Z0H3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcb1Q9Z0H3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcb1Q9Z0H3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Smarcb1Q9Z0H3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Smarcb1Q9Z0H3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcb1Q9Z0H3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcb1Q9Z0H3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcb1Q9Z0H3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcb1Q9Z0H3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcb1Q9Z0H3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcb1Q9Z0H3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Smarcb1Q9Z0H3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smarcb1Q9Z0H3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.64■□□□□ 0.9
Smarcb1Q9Z0H3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcb1Q9Z0H3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcb1Q9Z0H3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Smarcb1Q9Z0H3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcb1Q9Z0H3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcb1Q9Z0H3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcb1Q9Z0H3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcb1Q9Z0H3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcb1Q9Z0H3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcb1Q9Z0H3 Gm42642-201ENSMUST00000200683 355 ntBASIC20.63■□□□□ 0.89
Smarcb1Q9Z0H3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms