Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lhx9Q9WUH2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lhx9Q9WUH2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lhx9Q9WUH2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lhx9Q9WUH2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lhx9Q9WUH2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lhx9Q9WUH2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lhx9Q9WUH2 Gm43173-201ENSMUST00000202246 593 ntBASIC19.02■□□□□ 0.64
Lhx9Q9WUH2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.02■□□□□ 0.64
Lhx9Q9WUH2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.02■□□□□ 0.64
Lhx9Q9WUH2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lhx9Q9WUH2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lhx9Q9WUH2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lhx9Q9WUH2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lhx9Q9WUH2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lhx9Q9WUH2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Lhx9Q9WUH2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lhx9Q9WUH2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lhx9Q9WUH2 Gm12251-201ENSMUST00000117893 792 ntBASIC19.01■□□□□ 0.63
Lhx9Q9WUH2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.01■□□□□ 0.63
Lhx9Q9WUH2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Lhx9Q9WUH2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lhx9Q9WUH2 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.01■□□□□ 0.63
Lhx9Q9WUH2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lhx9Q9WUH2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.01■□□□□ 0.63
Lhx9Q9WUH2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lhx9Q9WUH2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lhx9Q9WUH2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lhx9Q9WUH2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19■□□□□ 0.63
Lhx9Q9WUH2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lhx9Q9WUH2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19■□□□□ 0.63
Lhx9Q9WUH2 Slc35b2-207ENSMUST00000226086 850 ntBASIC19■□□□□ 0.63
Lhx9Q9WUH2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
Lhx9Q9WUH2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19■□□□□ 0.63
Lhx9Q9WUH2 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lhx9Q9WUH2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lhx9Q9WUH2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Lhx9Q9WUH2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lhx9Q9WUH2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lhx9Q9WUH2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lhx9Q9WUH2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.99■□□□□ 0.63
Lhx9Q9WUH2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx9Q9WUH2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx9Q9WUH2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.98■□□□□ 0.63
Lhx9Q9WUH2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx9Q9WUH2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx9Q9WUH2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx9Q9WUH2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx9Q9WUH2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx9Q9WUH2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx9Q9WUH2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx9Q9WUH2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.98■□□□□ 0.63
Lhx9Q9WUH2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx9Q9WUH2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Lhx9Q9WUH2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Lhx9Q9WUH2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lhx9Q9WUH2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Lhx9Q9WUH2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lhx9Q9WUH2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.97■□□□□ 0.63
Lhx9Q9WUH2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.97■□□□□ 0.63
Lhx9Q9WUH2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.97■□□□□ 0.63
Lhx9Q9WUH2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lhx9Q9WUH2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Lhx9Q9WUH2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.97■□□□□ 0.63
Lhx9Q9WUH2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lhx9Q9WUH2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lhx9Q9WUH2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx9Q9WUH2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Lhx9Q9WUH2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx9Q9WUH2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx9Q9WUH2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx9Q9WUH2 Spcs1-204ENSMUST00000226782 949 ntBASIC18.96■□□□□ 0.63
Lhx9Q9WUH2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx9Q9WUH2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx9Q9WUH2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx9Q9WUH2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx9Q9WUH2 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.96■□□□□ 0.63
Lhx9Q9WUH2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Lhx9Q9WUH2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Lhx9Q9WUH2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.95■□□□□ 0.62
Lhx9Q9WUH2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.95■□□□□ 0.62
Lhx9Q9WUH2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx9Q9WUH2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx9Q9WUH2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx9Q9WUH2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
Lhx9Q9WUH2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx9Q9WUH2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx9Q9WUH2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx9Q9WUH2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx9Q9WUH2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Lhx9Q9WUH2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Lhx9Q9WUH2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx9Q9WUH2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Lhx9Q9WUH2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lhx9Q9WUH2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lhx9Q9WUH2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lhx9Q9WUH2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lhx9Q9WUH2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lhx9Q9WUH2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Lhx9Q9WUH2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms