Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CcsQ9WU84 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CcsQ9WU84 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CcsQ9WU84 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CcsQ9WU84 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CcsQ9WU84 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC15.31■□□□□ 0.04
CcsQ9WU84 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcsQ9WU84 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcsQ9WU84 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcsQ9WU84 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CcsQ9WU84 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CcsQ9WU84 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.31■□□□□ 0.04
CcsQ9WU84 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcsQ9WU84 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcsQ9WU84 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcsQ9WU84 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcsQ9WU84 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcsQ9WU84 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CcsQ9WU84 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CcsQ9WU84 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CcsQ9WU84 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CcsQ9WU84 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.3■□□□□ 0.04
CcsQ9WU84 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CcsQ9WU84 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.3■□□□□ 0.04
CcsQ9WU84 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CcsQ9WU84 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CcsQ9WU84 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CcsQ9WU84 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CcsQ9WU84 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CcsQ9WU84 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CcsQ9WU84 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CcsQ9WU84 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CcsQ9WU84 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.29■□□□□ 0.04
CcsQ9WU84 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CcsQ9WU84 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CcsQ9WU84 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CcsQ9WU84 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CcsQ9WU84 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CcsQ9WU84 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CcsQ9WU84 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CcsQ9WU84 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CcsQ9WU84 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CcsQ9WU84 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CcsQ9WU84 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CcsQ9WU84 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CcsQ9WU84 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC15.29■□□□□ 0.04
CcsQ9WU84 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CcsQ9WU84 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CcsQ9WU84 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CcsQ9WU84 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CcsQ9WU84 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CcsQ9WU84 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CcsQ9WU84 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CcsQ9WU84 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.28■□□□□ 0.04
CcsQ9WU84 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CcsQ9WU84 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CcsQ9WU84 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CcsQ9WU84 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CcsQ9WU84 Gm13238-201ENSMUST00000117655 780 ntBASIC15.28■□□□□ 0.04
CcsQ9WU84 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CcsQ9WU84 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CcsQ9WU84 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CcsQ9WU84 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CcsQ9WU84 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CcsQ9WU84 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CcsQ9WU84 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CcsQ9WU84 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CcsQ9WU84 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CcsQ9WU84 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CcsQ9WU84 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CcsQ9WU84 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CcsQ9WU84 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CcsQ9WU84 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CcsQ9WU84 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CcsQ9WU84 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CcsQ9WU84 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CcsQ9WU84 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CcsQ9WU84 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CcsQ9WU84 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CcsQ9WU84 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CcsQ9WU84 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CcsQ9WU84 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CcsQ9WU84 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CcsQ9WU84 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CcsQ9WU84 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.27■□□□□ 0.03
CcsQ9WU84 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CcsQ9WU84 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CcsQ9WU84 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC15.26■□□□□ 0.03
CcsQ9WU84 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.26■□□□□ 0.03
CcsQ9WU84 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CcsQ9WU84 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CcsQ9WU84 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CcsQ9WU84 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CcsQ9WU84 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CcsQ9WU84 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CcsQ9WU84 Gm15546-201ENSMUST00000122095 826 ntBASIC15.26■□□□□ 0.03
CcsQ9WU84 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CcsQ9WU84 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CcsQ9WU84 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CcsQ9WU84 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms