Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atp6ap1Q9R1Q9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atp6ap1Q9R1Q9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atp6ap1Q9R1Q9 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.47■□□□□ 0.71
Atp6ap1Q9R1Q9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atp6ap1Q9R1Q9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atp6ap1Q9R1Q9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atp6ap1Q9R1Q9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atp6ap1Q9R1Q9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Atp6ap1Q9R1Q9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atp6ap1Q9R1Q9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.47■□□□□ 0.71
Atp6ap1Q9R1Q9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Atp6ap1Q9R1Q9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atp6ap1Q9R1Q9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.46■□□□□ 0.71
Atp6ap1Q9R1Q9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Atp6ap1Q9R1Q9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atp6ap1Q9R1Q9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.46■□□□□ 0.71
Atp6ap1Q9R1Q9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Atp6ap1Q9R1Q9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Atp6ap1Q9R1Q9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atp6ap1Q9R1Q9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atp6ap1Q9R1Q9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atp6ap1Q9R1Q9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.45■□□□□ 0.7
Atp6ap1Q9R1Q9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Atp6ap1Q9R1Q9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atp6ap1Q9R1Q9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atp6ap1Q9R1Q9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atp6ap1Q9R1Q9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atp6ap1Q9R1Q9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atp6ap1Q9R1Q9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atp6ap1Q9R1Q9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Atp6ap1Q9R1Q9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Atp6ap1Q9R1Q9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Atp6ap1Q9R1Q9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.44■□□□□ 0.7
Atp6ap1Q9R1Q9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Atp6ap1Q9R1Q9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Atp6ap1Q9R1Q9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atp6ap1Q9R1Q9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atp6ap1Q9R1Q9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atp6ap1Q9R1Q9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atp6ap1Q9R1Q9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atp6ap1Q9R1Q9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atp6ap1Q9R1Q9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.43■□□□□ 0.7
Atp6ap1Q9R1Q9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
Atp6ap1Q9R1Q9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atp6ap1Q9R1Q9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atp6ap1Q9R1Q9 Gm21956-201ENSMUST00000179946 522 ntBASIC19.43■□□□□ 0.7
Atp6ap1Q9R1Q9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atp6ap1Q9R1Q9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atp6ap1Q9R1Q9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atp6ap1Q9R1Q9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.43■□□□□ 0.7
Atp6ap1Q9R1Q9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Atp6ap1Q9R1Q9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atp6ap1Q9R1Q9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Atp6ap1Q9R1Q9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atp6ap1Q9R1Q9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atp6ap1Q9R1Q9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atp6ap1Q9R1Q9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.42■□□□□ 0.7
Atp6ap1Q9R1Q9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atp6ap1Q9R1Q9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atp6ap1Q9R1Q9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atp6ap1Q9R1Q9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atp6ap1Q9R1Q9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atp6ap1Q9R1Q9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atp6ap1Q9R1Q9 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.42■□□□□ 0.7
Atp6ap1Q9R1Q9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atp6ap1Q9R1Q9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Atp6ap1Q9R1Q9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.41■□□□□ 0.7
Atp6ap1Q9R1Q9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.41■□□□□ 0.7
Atp6ap1Q9R1Q9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Atp6ap1Q9R1Q9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atp6ap1Q9R1Q9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atp6ap1Q9R1Q9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atp6ap1Q9R1Q9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atp6ap1Q9R1Q9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Atp6ap1Q9R1Q9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Atp6ap1Q9R1Q9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atp6ap1Q9R1Q9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.41■□□□□ 0.7
Atp6ap1Q9R1Q9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atp6ap1Q9R1Q9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atp6ap1Q9R1Q9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atp6ap1Q9R1Q9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atp6ap1Q9R1Q9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atp6ap1Q9R1Q9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atp6ap1Q9R1Q9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.4■□□□□ 0.7
Atp6ap1Q9R1Q9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.4■□□□□ 0.7
Atp6ap1Q9R1Q9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.4■□□□□ 0.7
Atp6ap1Q9R1Q9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atp6ap1Q9R1Q9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atp6ap1Q9R1Q9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atp6ap1Q9R1Q9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Atp6ap1Q9R1Q9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Atp6ap1Q9R1Q9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
Atp6ap1Q9R1Q9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Atp6ap1Q9R1Q9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atp6ap1Q9R1Q9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Atp6ap1Q9R1Q9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.39■□□□□ 0.69
Atp6ap1Q9R1Q9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Atp6ap1Q9R1Q9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
Atp6ap1Q9R1Q9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms