Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Col13a1Q9R1N9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col13a1Q9R1N9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col13a1Q9R1N9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col13a1Q9R1N9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col13a1Q9R1N9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col13a1Q9R1N9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col13a1Q9R1N9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col13a1Q9R1N9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col13a1Q9R1N9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col13a1Q9R1N9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Col13a1Q9R1N9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Col13a1Q9R1N9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col13a1Q9R1N9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col13a1Q9R1N9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.88■□□□□ 0.29
Col13a1Q9R1N9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Col13a1Q9R1N9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col13a1Q9R1N9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col13a1Q9R1N9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col13a1Q9R1N9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Col13a1Q9R1N9 Gm22325-201ENSMUST00000158904 308 ntBASIC16.87■□□□□ 0.29
Col13a1Q9R1N9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col13a1Q9R1N9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.87■□□□□ 0.29
Col13a1Q9R1N9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.87■□□□□ 0.29
Col13a1Q9R1N9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.87■□□□□ 0.29
Col13a1Q9R1N9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col13a1Q9R1N9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col13a1Q9R1N9 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.87■□□□□ 0.29
Col13a1Q9R1N9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col13a1Q9R1N9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.86■□□□□ 0.29
Col13a1Q9R1N9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col13a1Q9R1N9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Col13a1Q9R1N9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col13a1Q9R1N9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col13a1Q9R1N9 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.86■□□□□ 0.29
Col13a1Q9R1N9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col13a1Q9R1N9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col13a1Q9R1N9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Col13a1Q9R1N9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col13a1Q9R1N9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.86■□□□□ 0.29
Col13a1Q9R1N9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Col13a1Q9R1N9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Col13a1Q9R1N9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col13a1Q9R1N9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col13a1Q9R1N9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col13a1Q9R1N9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col13a1Q9R1N9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col13a1Q9R1N9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col13a1Q9R1N9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Col13a1Q9R1N9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col13a1Q9R1N9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Col13a1Q9R1N9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Col13a1Q9R1N9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.85■□□□□ 0.29
Col13a1Q9R1N9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.85■□□□□ 0.29
Col13a1Q9R1N9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.85■□□□□ 0.29
Col13a1Q9R1N9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.85■□□□□ 0.29
Col13a1Q9R1N9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.85■□□□□ 0.29
Col13a1Q9R1N9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.85■□□□□ 0.29
Col13a1Q9R1N9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col13a1Q9R1N9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Col13a1Q9R1N9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.85■□□□□ 0.29
Col13a1Q9R1N9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col13a1Q9R1N9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col13a1Q9R1N9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col13a1Q9R1N9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col13a1Q9R1N9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
Col13a1Q9R1N9 Gm12933-201ENSMUST00000120203 872 ntBASIC16.84■□□□□ 0.29
Col13a1Q9R1N9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col13a1Q9R1N9 Gm10653-202ENSMUST00000139570 835 ntBASIC16.84■□□□□ 0.29
Col13a1Q9R1N9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Col13a1Q9R1N9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col13a1Q9R1N9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col13a1Q9R1N9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col13a1Q9R1N9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Col13a1Q9R1N9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.84■□□□□ 0.29
Col13a1Q9R1N9 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.84■□□□□ 0.29
Col13a1Q9R1N9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col13a1Q9R1N9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col13a1Q9R1N9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col13a1Q9R1N9 Gm10252-201ENSMUST00000209541 832 ntBASIC16.83■□□□□ 0.28
Col13a1Q9R1N9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col13a1Q9R1N9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.83■□□□□ 0.28
Col13a1Q9R1N9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col13a1Q9R1N9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col13a1Q9R1N9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col13a1Q9R1N9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.82■□□□□ 0.28
Col13a1Q9R1N9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Col13a1Q9R1N9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col13a1Q9R1N9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col13a1Q9R1N9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.82■□□□□ 0.28
Col13a1Q9R1N9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.82■□□□□ 0.28
Col13a1Q9R1N9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.82■□□□□ 0.28
Col13a1Q9R1N9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col13a1Q9R1N9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col13a1Q9R1N9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Col13a1Q9R1N9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col13a1Q9R1N9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col13a1Q9R1N9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col13a1Q9R1N9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.81■□□□□ 0.28
Col13a1Q9R1N9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms