Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RpgrQ9R0X5 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RpgrQ9R0X5 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RpgrQ9R0X5 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RpgrQ9R0X5 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RpgrQ9R0X5 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RpgrQ9R0X5 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RpgrQ9R0X5 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RpgrQ9R0X5 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RpgrQ9R0X5 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RpgrQ9R0X5 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RpgrQ9R0X5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RpgrQ9R0X5 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RpgrQ9R0X5 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RpgrQ9R0X5 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.05■□□□□ 0.8
RpgrQ9R0X5 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.04■□□□□ 0.8
RpgrQ9R0X5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RpgrQ9R0X5 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RpgrQ9R0X5 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RpgrQ9R0X5 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.04■□□□□ 0.8
RpgrQ9R0X5 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.04■□□□□ 0.8
RpgrQ9R0X5 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.04■□□□□ 0.8
RpgrQ9R0X5 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RpgrQ9R0X5 Gm7143-201ENSMUST00000222811 859 ntBASIC20.04■□□□□ 0.8
RpgrQ9R0X5 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RpgrQ9R0X5 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
RpgrQ9R0X5 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RpgrQ9R0X5 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RpgrQ9R0X5 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RpgrQ9R0X5 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RpgrQ9R0X5 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RpgrQ9R0X5 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RpgrQ9R0X5 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RpgrQ9R0X5 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RpgrQ9R0X5 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RpgrQ9R0X5 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RpgrQ9R0X5 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RpgrQ9R0X5 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RpgrQ9R0X5 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.02■□□□□ 0.8
RpgrQ9R0X5 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RpgrQ9R0X5 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RpgrQ9R0X5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RpgrQ9R0X5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RpgrQ9R0X5 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RpgrQ9R0X5 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.02■□□□□ 0.79
RpgrQ9R0X5 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RpgrQ9R0X5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RpgrQ9R0X5 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RpgrQ9R0X5 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RpgrQ9R0X5 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RpgrQ9R0X5 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RpgrQ9R0X5 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20■□□□□ 0.79
RpgrQ9R0X5 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20■□□□□ 0.79
RpgrQ9R0X5 Gm9870-201ENSMUST00000063874 645 ntBASIC20■□□□□ 0.79
RpgrQ9R0X5 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RpgrQ9R0X5 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RpgrQ9R0X5 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
RpgrQ9R0X5 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RpgrQ9R0X5 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RpgrQ9R0X5 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RpgrQ9R0X5 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RpgrQ9R0X5 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RpgrQ9R0X5 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.99■□□□□ 0.79
RpgrQ9R0X5 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.99■□□□□ 0.79
RpgrQ9R0X5 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RpgrQ9R0X5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RpgrQ9R0X5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RpgrQ9R0X5 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RpgrQ9R0X5 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RpgrQ9R0X5 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RpgrQ9R0X5 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RpgrQ9R0X5 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RpgrQ9R0X5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RpgrQ9R0X5 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RpgrQ9R0X5 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RpgrQ9R0X5 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RpgrQ9R0X5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RpgrQ9R0X5 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
RpgrQ9R0X5 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RpgrQ9R0X5 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RpgrQ9R0X5 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RpgrQ9R0X5 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RpgrQ9R0X5 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RpgrQ9R0X5 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RpgrQ9R0X5 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RpgrQ9R0X5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RpgrQ9R0X5 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RpgrQ9R0X5 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RpgrQ9R0X5 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RpgrQ9R0X5 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RpgrQ9R0X5 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RpgrQ9R0X5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RpgrQ9R0X5 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RpgrQ9R0X5 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RpgrQ9R0X5 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RpgrQ9R0X5 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RpgrQ9R0X5 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RpgrQ9R0X5 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RpgrQ9R0X5 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.96■□□□□ 0.79
RpgrQ9R0X5 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms