Protein–RNA interactions for Protein: Q9R087

Gpc6, Glypican-6, mousemouse

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gpc6Q9R087 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gpc6Q9R087 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Gpc6Q9R087 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gpc6Q9R087 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Gpc6Q9R087 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gpc6Q9R087 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gpc6Q9R087 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gpc6Q9R087 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gpc6Q9R087 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Gpc6Q9R087 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gpc6Q9R087 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gpc6Q9R087 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gpc6Q9R087 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gpc6Q9R087 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gpc6Q9R087 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gpc6Q9R087 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gpc6Q9R087 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.41■□□□□ 0.54
Gpc6Q9R087 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gpc6Q9R087 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Gpc6Q9R087 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gpc6Q9R087 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gpc6Q9R087 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gpc6Q9R087 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gpc6Q9R087 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gpc6Q9R087 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gpc6Q9R087 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Gpc6Q9R087 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gpc6Q9R087 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gpc6Q9R087 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Gpc6Q9R087 Gm13238-201ENSMUST00000117655 780 ntBASIC18.4■□□□□ 0.54
Gpc6Q9R087 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Gpc6Q9R087 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gpc6Q9R087 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Gpc6Q9R087 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Gpc6Q9R087 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Gpc6Q9R087 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Gpc6Q9R087 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gpc6Q9R087 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gpc6Q9R087 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.39■□□□□ 0.53
Gpc6Q9R087 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Gpc6Q9R087 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Gpc6Q9R087 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gpc6Q9R087 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Gpc6Q9R087 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Gpc6Q9R087 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gpc6Q9R087 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Gpc6Q9R087 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gpc6Q9R087 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gpc6Q9R087 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gpc6Q9R087 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gpc6Q9R087 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gpc6Q9R087 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gpc6Q9R087 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gpc6Q9R087 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gpc6Q9R087 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gpc6Q9R087 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gpc6Q9R087 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gpc6Q9R087 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Gpc6Q9R087 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gpc6Q9R087 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gpc6Q9R087 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gpc6Q9R087 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gpc6Q9R087 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gpc6Q9R087 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.37■□□□□ 0.53
Gpc6Q9R087 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gpc6Q9R087 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.37■□□□□ 0.53
Gpc6Q9R087 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gpc6Q9R087 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gpc6Q9R087 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gpc6Q9R087 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gpc6Q9R087 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gpc6Q9R087 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Gpc6Q9R087 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gpc6Q9R087 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Gpc6Q9R087 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.37■□□□□ 0.53
Gpc6Q9R087 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.36■□□□□ 0.53
Gpc6Q9R087 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Gpc6Q9R087 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.36■□□□□ 0.53
Gpc6Q9R087 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.36■□□□□ 0.53
Gpc6Q9R087 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gpc6Q9R087 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.36■□□□□ 0.53
Gpc6Q9R087 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.36■□□□□ 0.53
Gpc6Q9R087 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gpc6Q9R087 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gpc6Q9R087 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gpc6Q9R087 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Gpc6Q9R087 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Gpc6Q9R087 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gpc6Q9R087 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
Gpc6Q9R087 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gpc6Q9R087 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gpc6Q9R087 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gpc6Q9R087 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gpc6Q9R087 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.35■□□□□ 0.53
Gpc6Q9R087 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.35■□□□□ 0.53
Gpc6Q9R087 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gpc6Q9R087 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gpc6Q9R087 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gpc6Q9R087 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gpc6Q9R087 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms