Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Clcf1Q9QZM3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clcf1Q9QZM3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clcf1Q9QZM3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clcf1Q9QZM3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcf1Q9QZM3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcf1Q9QZM3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcf1Q9QZM3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcf1Q9QZM3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcf1Q9QZM3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.98■□□□□ 0.47
Clcf1Q9QZM3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcf1Q9QZM3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcf1Q9QZM3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcf1Q9QZM3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Clcf1Q9QZM3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcf1Q9QZM3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Clcf1Q9QZM3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcf1Q9QZM3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcf1Q9QZM3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcf1Q9QZM3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Clcf1Q9QZM3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.96■□□□□ 0.47
Clcf1Q9QZM3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Clcf1Q9QZM3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Clcf1Q9QZM3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Clcf1Q9QZM3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Clcf1Q9QZM3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcf1Q9QZM3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcf1Q9QZM3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.96■□□□□ 0.47
Clcf1Q9QZM3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Clcf1Q9QZM3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcf1Q9QZM3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcf1Q9QZM3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcf1Q9QZM3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcf1Q9QZM3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.95■□□□□ 0.46
Clcf1Q9QZM3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.95■□□□□ 0.46
Clcf1Q9QZM3 Gm6139-201ENSMUST00000079261 882 ntBASIC17.95■□□□□ 0.46
Clcf1Q9QZM3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcf1Q9QZM3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Clcf1Q9QZM3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Clcf1Q9QZM3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcf1Q9QZM3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcf1Q9QZM3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcf1Q9QZM3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clcf1Q9QZM3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcf1Q9QZM3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Clcf1Q9QZM3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcf1Q9QZM3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.94■□□□□ 0.46
Clcf1Q9QZM3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.94■□□□□ 0.46
Clcf1Q9QZM3 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.94■□□□□ 0.46
Clcf1Q9QZM3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcf1Q9QZM3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcf1Q9QZM3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcf1Q9QZM3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Clcf1Q9QZM3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcf1Q9QZM3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcf1Q9QZM3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Clcf1Q9QZM3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcf1Q9QZM3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.93■□□□□ 0.46
Clcf1Q9QZM3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Clcf1Q9QZM3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Clcf1Q9QZM3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Clcf1Q9QZM3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.93■□□□□ 0.46
Clcf1Q9QZM3 Mir7075-201ENSMUST00000184187 82 ntBASIC17.93■□□□□ 0.46
Clcf1Q9QZM3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.93■□□□□ 0.46
Clcf1Q9QZM3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Clcf1Q9QZM3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcf1Q9QZM3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcf1Q9QZM3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Clcf1Q9QZM3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcf1Q9QZM3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcf1Q9QZM3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcf1Q9QZM3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Clcf1Q9QZM3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcf1Q9QZM3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Clcf1Q9QZM3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Clcf1Q9QZM3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcf1Q9QZM3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Clcf1Q9QZM3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.92■□□□□ 0.46
Clcf1Q9QZM3 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.92■□□□□ 0.46
Clcf1Q9QZM3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcf1Q9QZM3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcf1Q9QZM3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.91■□□□□ 0.46
Clcf1Q9QZM3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clcf1Q9QZM3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Clcf1Q9QZM3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Clcf1Q9QZM3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcf1Q9QZM3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcf1Q9QZM3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcf1Q9QZM3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.91■□□□□ 0.46
Clcf1Q9QZM3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcf1Q9QZM3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcf1Q9QZM3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcf1Q9QZM3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Clcf1Q9QZM3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clcf1Q9QZM3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clcf1Q9QZM3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clcf1Q9QZM3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clcf1Q9QZM3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clcf1Q9QZM3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clcf1Q9QZM3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms