Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.06■□□□□ 0.8
Shroom3Q9QXN0 Gm8495-201ENSMUST00000188740 694 ntBASIC20.06■□□□□ 0.8
Shroom3Q9QXN0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.06■□□□□ 0.8
Shroom3Q9QXN0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Shroom3Q9QXN0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shroom3Q9QXN0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Shroom3Q9QXN0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.05■□□□□ 0.8
Shroom3Q9QXN0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shroom3Q9QXN0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shroom3Q9QXN0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shroom3Q9QXN0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.05■□□□□ 0.8
Shroom3Q9QXN0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Shroom3Q9QXN0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Shroom3Q9QXN0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Shroom3Q9QXN0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shroom3Q9QXN0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shroom3Q9QXN0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shroom3Q9QXN0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shroom3Q9QXN0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shroom3Q9QXN0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Shroom3Q9QXN0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Shroom3Q9QXN0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shroom3Q9QXN0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Shroom3Q9QXN0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shroom3Q9QXN0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shroom3Q9QXN0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Shroom3Q9QXN0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.03■□□□□ 0.8
Shroom3Q9QXN0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Shroom3Q9QXN0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Shroom3Q9QXN0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Shroom3Q9QXN0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shroom3Q9QXN0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Shroom3Q9QXN0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shroom3Q9QXN0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.03■□□□□ 0.8
Shroom3Q9QXN0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shroom3Q9QXN0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Shroom3Q9QXN0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Shroom3Q9QXN0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.03■□□□□ 0.8
Shroom3Q9QXN0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Shroom3Q9QXN0 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.03■□□□□ 0.8
Shroom3Q9QXN0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Shroom3Q9QXN0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Shroom3Q9QXN0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Shroom3Q9QXN0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
Shroom3Q9QXN0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Shroom3Q9QXN0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Shroom3Q9QXN0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Shroom3Q9QXN0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Shroom3Q9QXN0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shroom3Q9QXN0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.01■□□□□ 0.79
Shroom3Q9QXN0 Mir7075-201ENSMUST00000184187 82 ntBASIC20.01■□□□□ 0.79
Shroom3Q9QXN0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shroom3Q9QXN0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shroom3Q9QXN0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Shroom3Q9QXN0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shroom3Q9QXN0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Shroom3Q9QXN0 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.01■□□□□ 0.79
Shroom3Q9QXN0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Shroom3Q9QXN0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Shroom3Q9QXN0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Shroom3Q9QXN0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Shroom3Q9QXN0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Shroom3Q9QXN0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Shroom3Q9QXN0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20■□□□□ 0.79
Shroom3Q9QXN0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20■□□□□ 0.79
Shroom3Q9QXN0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Shroom3Q9QXN0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Shroom3Q9QXN0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Shroom3Q9QXN0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Shroom3Q9QXN0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20■□□□□ 0.79
Shroom3Q9QXN0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20■□□□□ 0.79
Shroom3Q9QXN0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shroom3Q9QXN0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
Shroom3Q9QXN0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.99■□□□□ 0.79
Shroom3Q9QXN0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shroom3Q9QXN0 Gm26571-201ENSMUST00000181399 666 ntBASIC19.99■□□□□ 0.79
Shroom3Q9QXN0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Shroom3Q9QXN0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Shroom3Q9QXN0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Shroom3Q9QXN0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
Shroom3Q9QXN0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shroom3Q9QXN0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shroom3Q9QXN0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Shroom3Q9QXN0 Gm29257-201ENSMUST00000186115 639 ntBASIC19.99■□□□□ 0.79
Shroom3Q9QXN0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Shroom3Q9QXN0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shroom3Q9QXN0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Shroom3Q9QXN0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shroom3Q9QXN0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shroom3Q9QXN0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.98■□□□□ 0.79
Shroom3Q9QXN0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shroom3Q9QXN0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shroom3Q9QXN0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Shroom3Q9QXN0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Shroom3Q9QXN0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.97■□□□□ 0.79
Shroom3Q9QXN0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shroom3Q9QXN0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.97■□□□□ 0.79
Shroom3Q9QXN0 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.97■□□□□ 0.79
Shroom3Q9QXN0 Gm43173-201ENSMUST00000202246 593 ntBASIC19.97■□□□□ 0.79
Shroom3Q9QXN0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms