Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sec61a2Q9JLR1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.84■□□□□ 0.45
Sec61a2Q9JLR1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.84■□□□□ 0.45
Sec61a2Q9JLR1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sec61a2Q9JLR1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sec61a2Q9JLR1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sec61a2Q9JLR1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sec61a2Q9JLR1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sec61a2Q9JLR1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sec61a2Q9JLR1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sec61a2Q9JLR1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sec61a2Q9JLR1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Sec61a2Q9JLR1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sec61a2Q9JLR1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Sec61a2Q9JLR1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sec61a2Q9JLR1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sec61a2Q9JLR1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sec61a2Q9JLR1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sec61a2Q9JLR1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sec61a2Q9JLR1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sec61a2Q9JLR1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sec61a2Q9JLR1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Sec61a2Q9JLR1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Sec61a2Q9JLR1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sec61a2Q9JLR1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sec61a2Q9JLR1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Sec61a2Q9JLR1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sec61a2Q9JLR1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sec61a2Q9JLR1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sec61a2Q9JLR1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sec61a2Q9JLR1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sec61a2Q9JLR1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sec61a2Q9JLR1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sec61a2Q9JLR1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sec61a2Q9JLR1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.81■□□□□ 0.44
Sec61a2Q9JLR1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sec61a2Q9JLR1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Sec61a2Q9JLR1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sec61a2Q9JLR1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sec61a2Q9JLR1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
Sec61a2Q9JLR1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.8■□□□□ 0.44
Sec61a2Q9JLR1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sec61a2Q9JLR1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sec61a2Q9JLR1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sec61a2Q9JLR1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sec61a2Q9JLR1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sec61a2Q9JLR1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sec61a2Q9JLR1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sec61a2Q9JLR1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Sec61a2Q9JLR1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.79■□□□□ 0.44
Sec61a2Q9JLR1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sec61a2Q9JLR1 Gm9870-201ENSMUST00000063874 645 ntBASIC17.79■□□□□ 0.44
Sec61a2Q9JLR1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Sec61a2Q9JLR1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.79■□□□□ 0.44
Sec61a2Q9JLR1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sec61a2Q9JLR1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sec61a2Q9JLR1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sec61a2Q9JLR1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sec61a2Q9JLR1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sec61a2Q9JLR1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sec61a2Q9JLR1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sec61a2Q9JLR1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sec61a2Q9JLR1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sec61a2Q9JLR1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sec61a2Q9JLR1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sec61a2Q9JLR1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sec61a2Q9JLR1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sec61a2Q9JLR1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sec61a2Q9JLR1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sec61a2Q9JLR1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sec61a2Q9JLR1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sec61a2Q9JLR1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sec61a2Q9JLR1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.77■□□□□ 0.44
Sec61a2Q9JLR1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.77■□□□□ 0.44
Sec61a2Q9JLR1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.77■□□□□ 0.44
Sec61a2Q9JLR1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sec61a2Q9JLR1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Sec61a2Q9JLR1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sec61a2Q9JLR1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Sec61a2Q9JLR1 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.77■□□□□ 0.43
Sec61a2Q9JLR1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sec61a2Q9JLR1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sec61a2Q9JLR1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sec61a2Q9JLR1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Sec61a2Q9JLR1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sec61a2Q9JLR1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sec61a2Q9JLR1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sec61a2Q9JLR1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sec61a2Q9JLR1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sec61a2Q9JLR1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sec61a2Q9JLR1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sec61a2Q9JLR1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.76■□□□□ 0.43
Sec61a2Q9JLR1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Sec61a2Q9JLR1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sec61a2Q9JLR1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sec61a2Q9JLR1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sec61a2Q9JLR1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sec61a2Q9JLR1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Sec61a2Q9JLR1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
Sec61a2Q9JLR1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms