Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.5■□□□□ 0.55
Zc3h8Q9JJ48 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Zc3h8Q9JJ48 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h8Q9JJ48 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h8Q9JJ48 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h8Q9JJ48 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h8Q9JJ48 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h8Q9JJ48 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h8Q9JJ48 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h8Q9JJ48 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h8Q9JJ48 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h8Q9JJ48 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.49■□□□□ 0.55
Zc3h8Q9JJ48 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h8Q9JJ48 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h8Q9JJ48 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h8Q9JJ48 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h8Q9JJ48 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.49■□□□□ 0.55
Zc3h8Q9JJ48 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h8Q9JJ48 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Zc3h8Q9JJ48 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Zc3h8Q9JJ48 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h8Q9JJ48 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h8Q9JJ48 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.48■□□□□ 0.55
Zc3h8Q9JJ48 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h8Q9JJ48 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h8Q9JJ48 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Zc3h8Q9JJ48 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h8Q9JJ48 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h8Q9JJ48 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h8Q9JJ48 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h8Q9JJ48 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h8Q9JJ48 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h8Q9JJ48 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h8Q9JJ48 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zc3h8Q9JJ48 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Zc3h8Q9JJ48 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zc3h8Q9JJ48 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zc3h8Q9JJ48 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Zc3h8Q9JJ48 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Zc3h8Q9JJ48 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Zc3h8Q9JJ48 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zc3h8Q9JJ48 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.47■□□□□ 0.55
Zc3h8Q9JJ48 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zc3h8Q9JJ48 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.47■□□□□ 0.55
Zc3h8Q9JJ48 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Zc3h8Q9JJ48 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Zc3h8Q9JJ48 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Zc3h8Q9JJ48 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Zc3h8Q9JJ48 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Zc3h8Q9JJ48 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Zc3h8Q9JJ48 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Zc3h8Q9JJ48 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.46■□□□□ 0.55
Zc3h8Q9JJ48 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.46■□□□□ 0.55
Zc3h8Q9JJ48 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Zc3h8Q9JJ48 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.46■□□□□ 0.55
Zc3h8Q9JJ48 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.46■□□□□ 0.55
Zc3h8Q9JJ48 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Zc3h8Q9JJ48 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Zc3h8Q9JJ48 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Zc3h8Q9JJ48 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Zc3h8Q9JJ48 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Zc3h8Q9JJ48 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Zc3h8Q9JJ48 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Zc3h8Q9JJ48 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Zc3h8Q9JJ48 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Zc3h8Q9JJ48 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
Zc3h8Q9JJ48 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Zc3h8Q9JJ48 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Zc3h8Q9JJ48 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Zc3h8Q9JJ48 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.45■□□□□ 0.54
Zc3h8Q9JJ48 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Zc3h8Q9JJ48 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zc3h8Q9JJ48 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Zc3h8Q9JJ48 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zc3h8Q9JJ48 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Zc3h8Q9JJ48 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zc3h8Q9JJ48 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zc3h8Q9JJ48 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zc3h8Q9JJ48 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zc3h8Q9JJ48 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zc3h8Q9JJ48 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.44■□□□□ 0.54
Zc3h8Q9JJ48 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Zc3h8Q9JJ48 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.44■□□□□ 0.54
Zc3h8Q9JJ48 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zc3h8Q9JJ48 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Zc3h8Q9JJ48 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
Zc3h8Q9JJ48 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Zc3h8Q9JJ48 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Zc3h8Q9JJ48 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Zc3h8Q9JJ48 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Zc3h8Q9JJ48 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Zc3h8Q9JJ48 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Zc3h8Q9JJ48 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Zc3h8Q9JJ48 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Zc3h8Q9JJ48 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Zc3h8Q9JJ48 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zc3h8Q9JJ48 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zc3h8Q9JJ48 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Zc3h8Q9JJ48 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Zc3h8Q9JJ48 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms