Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ClpxQ9JHS4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
ClpxQ9JHS4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ClpxQ9JHS4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ClpxQ9JHS4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClpxQ9JHS4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClpxQ9JHS4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClpxQ9JHS4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClpxQ9JHS4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClpxQ9JHS4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClpxQ9JHS4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ClpxQ9JHS4 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClpxQ9JHS4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ClpxQ9JHS4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ClpxQ9JHS4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ClpxQ9JHS4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ClpxQ9JHS4 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ClpxQ9JHS4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ClpxQ9JHS4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ClpxQ9JHS4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ClpxQ9JHS4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ClpxQ9JHS4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ClpxQ9JHS4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
ClpxQ9JHS4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ClpxQ9JHS4 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ClpxQ9JHS4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
ClpxQ9JHS4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ClpxQ9JHS4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ClpxQ9JHS4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ClpxQ9JHS4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ClpxQ9JHS4 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.08■□□□□ 0.48
ClpxQ9JHS4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ClpxQ9JHS4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.08■□□□□ 0.48
ClpxQ9JHS4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ClpxQ9JHS4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ClpxQ9JHS4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ClpxQ9JHS4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ClpxQ9JHS4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
ClpxQ9JHS4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ClpxQ9JHS4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ClpxQ9JHS4 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ClpxQ9JHS4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ClpxQ9JHS4 Rps24-207ENSMUST00000224568 714 ntBASIC18.06■□□□□ 0.48
ClpxQ9JHS4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ClpxQ9JHS4 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
ClpxQ9JHS4 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ClpxQ9JHS4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ClpxQ9JHS4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ClpxQ9JHS4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ClpxQ9JHS4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ClpxQ9JHS4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ClpxQ9JHS4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ClpxQ9JHS4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
ClpxQ9JHS4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ClpxQ9JHS4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ClpxQ9JHS4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ClpxQ9JHS4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
ClpxQ9JHS4 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ClpxQ9JHS4 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ClpxQ9JHS4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ClpxQ9JHS4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ClpxQ9JHS4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ClpxQ9JHS4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ClpxQ9JHS4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.04■□□□□ 0.48
ClpxQ9JHS4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ClpxQ9JHS4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ClpxQ9JHS4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
ClpxQ9JHS4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ClpxQ9JHS4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.04■□□□□ 0.48
ClpxQ9JHS4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ClpxQ9JHS4 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
ClpxQ9JHS4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ClpxQ9JHS4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ClpxQ9JHS4 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ClpxQ9JHS4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.03■□□□□ 0.48
ClpxQ9JHS4 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ClpxQ9JHS4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ClpxQ9JHS4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
ClpxQ9JHS4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ClpxQ9JHS4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ClpxQ9JHS4 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
ClpxQ9JHS4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ClpxQ9JHS4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
ClpxQ9JHS4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ClpxQ9JHS4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.02■□□□□ 0.48
ClpxQ9JHS4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ClpxQ9JHS4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.02■□□□□ 0.47
ClpxQ9JHS4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.01■□□□□ 0.47
ClpxQ9JHS4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ClpxQ9JHS4 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ClpxQ9JHS4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
ClpxQ9JHS4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.01■□□□□ 0.47
ClpxQ9JHS4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.01■□□□□ 0.47
ClpxQ9JHS4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ClpxQ9JHS4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ClpxQ9JHS4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ClpxQ9JHS4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ClpxQ9JHS4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ClpxQ9JHS4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18■□□□□ 0.47
ClpxQ9JHS4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms