Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf13bQ9ET35 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf13bQ9ET35 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf13bQ9ET35 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.69■□□□□ 0.1
Tnfrsf13bQ9ET35 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf13bQ9ET35 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf13bQ9ET35 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf13bQ9ET35 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf13bQ9ET35 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf13bQ9ET35 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf13bQ9ET35 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.69■□□□□ 0.1
Tnfrsf13bQ9ET35 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf13bQ9ET35 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf13bQ9ET35 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Tnfrsf13bQ9ET35 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf13bQ9ET35 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf13bQ9ET35 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf13bQ9ET35 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf13bQ9ET35 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf13bQ9ET35 Gm5067-201ENSMUST00000170449 1009 ntBASIC15.68■□□□□ 0.1
Tnfrsf13bQ9ET35 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf13bQ9ET35 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf13bQ9ET35 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf13bQ9ET35 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf13bQ9ET35 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf13bQ9ET35 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf13bQ9ET35 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf13bQ9ET35 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Tnfrsf13bQ9ET35 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf13bQ9ET35 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf13bQ9ET35 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.67■□□□□ 0.1
Tnfrsf13bQ9ET35 Nsd1-203ENSMUST00000224156 1149 ntBASIC15.67■□□□□ 0.1
Tnfrsf13bQ9ET35 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf13bQ9ET35 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf13bQ9ET35 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf13bQ9ET35 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf13bQ9ET35 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf13bQ9ET35 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf13bQ9ET35 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf13bQ9ET35 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf13bQ9ET35 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf13bQ9ET35 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf13bQ9ET35 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf13bQ9ET35 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf13bQ9ET35 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Tnfrsf13bQ9ET35 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf13bQ9ET35 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Tnfrsf13bQ9ET35 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Tnfrsf13bQ9ET35 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf13bQ9ET35 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.66■□□□□ 0.1
Tnfrsf13bQ9ET35 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf13bQ9ET35 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf13bQ9ET35 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf13bQ9ET35 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf13bQ9ET35 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15.65■□□□□ 0.1
Tnfrsf13bQ9ET35 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf13bQ9ET35 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf13bQ9ET35 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf13bQ9ET35 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf13bQ9ET35 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.65■□□□□ 0.1
Tnfrsf13bQ9ET35 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf13bQ9ET35 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf13bQ9ET35 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf13bQ9ET35 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf13bQ9ET35 Golph3-205ENSMUST00000228671 2842 ntBASIC15.64■□□□□ 0.09
Tnfrsf13bQ9ET35 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Tnfrsf13bQ9ET35 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.64■□□□□ 0.09
Tnfrsf13bQ9ET35 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.64■□□□□ 0.09
Tnfrsf13bQ9ET35 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Tnfrsf13bQ9ET35 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Tnfrsf13bQ9ET35 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf13bQ9ET35 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf13bQ9ET35 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf13bQ9ET35 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC15.64■□□□□ 0.09
Tnfrsf13bQ9ET35 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf13bQ9ET35 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf13bQ9ET35 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf13bQ9ET35 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf13bQ9ET35 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf13bQ9ET35 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf13bQ9ET35 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf13bQ9ET35 Mir6538-201ENSMUST00000183713 110 ntBASIC15.63■□□□□ 0.09
Tnfrsf13bQ9ET35 Gm45444-201ENSMUST00000211394 898 ntBASIC15.63■□□□□ 0.09
Tnfrsf13bQ9ET35 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf13bQ9ET35 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.63■□□□□ 0.09
Tnfrsf13bQ9ET35 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf13bQ9ET35 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Tnfrsf13bQ9ET35 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf13bQ9ET35 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf13bQ9ET35 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf13bQ9ET35 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf13bQ9ET35 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf13bQ9ET35 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.62■□□□□ 0.09
Tnfrsf13bQ9ET35 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf13bQ9ET35 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf13bQ9ET35 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.62■□□□□ 0.09
Tnfrsf13bQ9ET35 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.62■□□□□ 0.09
Tnfrsf13bQ9ET35 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf13bQ9ET35 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.62■□□□□ 0.09
Tnfrsf13bQ9ET35 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms