Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim39Q9ESN2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim39Q9ESN2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim39Q9ESN2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim39Q9ESN2 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.43■□□□□ 0.54
Trim39Q9ESN2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.42■□□□□ 0.54
Trim39Q9ESN2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trim39Q9ESN2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.42■□□□□ 0.54
Trim39Q9ESN2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim39Q9ESN2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim39Q9ESN2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim39Q9ESN2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim39Q9ESN2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim39Q9ESN2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim39Q9ESN2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim39Q9ESN2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim39Q9ESN2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim39Q9ESN2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trim39Q9ESN2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.41■□□□□ 0.54
Trim39Q9ESN2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trim39Q9ESN2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim39Q9ESN2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim39Q9ESN2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Trim39Q9ESN2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim39Q9ESN2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.41■□□□□ 0.54
Trim39Q9ESN2 Gm7417-201ENSMUST00000192950 473 ntBASIC18.41■□□□□ 0.54
Trim39Q9ESN2 Gm9959-201ENSMUST00000068277 390 ntBASIC18.41■□□□□ 0.54
Trim39Q9ESN2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.41■□□□□ 0.54
Trim39Q9ESN2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trim39Q9ESN2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim39Q9ESN2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim39Q9ESN2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim39Q9ESN2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim39Q9ESN2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim39Q9ESN2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim39Q9ESN2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.4■□□□□ 0.54
Trim39Q9ESN2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim39Q9ESN2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trim39Q9ESN2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.39■□□□□ 0.54
Trim39Q9ESN2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim39Q9ESN2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trim39Q9ESN2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim39Q9ESN2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim39Q9ESN2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim39Q9ESN2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim39Q9ESN2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Trim39Q9ESN2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Trim39Q9ESN2 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.39■□□□□ 0.53
Trim39Q9ESN2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim39Q9ESN2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim39Q9ESN2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim39Q9ESN2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim39Q9ESN2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim39Q9ESN2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim39Q9ESN2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim39Q9ESN2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim39Q9ESN2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim39Q9ESN2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim39Q9ESN2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim39Q9ESN2 Rps24-207ENSMUST00000224568 714 ntBASIC18.37■□□□□ 0.53
Trim39Q9ESN2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim39Q9ESN2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim39Q9ESN2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim39Q9ESN2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.37■□□□□ 0.53
Trim39Q9ESN2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.37■□□□□ 0.53
Trim39Q9ESN2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim39Q9ESN2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim39Q9ESN2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim39Q9ESN2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trim39Q9ESN2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim39Q9ESN2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim39Q9ESN2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim39Q9ESN2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.36■□□□□ 0.53
Trim39Q9ESN2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim39Q9ESN2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim39Q9ESN2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.36■□□□□ 0.53
Trim39Q9ESN2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim39Q9ESN2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim39Q9ESN2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim39Q9ESN2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trim39Q9ESN2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.35■□□□□ 0.53
Trim39Q9ESN2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim39Q9ESN2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim39Q9ESN2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim39Q9ESN2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim39Q9ESN2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim39Q9ESN2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim39Q9ESN2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trim39Q9ESN2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim39Q9ESN2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim39Q9ESN2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.34■□□□□ 0.53
Trim39Q9ESN2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim39Q9ESN2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trim39Q9ESN2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim39Q9ESN2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim39Q9ESN2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim39Q9ESN2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim39Q9ESN2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim39Q9ESN2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Trim39Q9ESN2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms