Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps35Q9EQH3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps35Q9EQH3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps35Q9EQH3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps35Q9EQH3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Vps35Q9EQH3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps35Q9EQH3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps35Q9EQH3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps35Q9EQH3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.87■□□□□ 0.77
Vps35Q9EQH3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Vps35Q9EQH3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Vps35Q9EQH3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps35Q9EQH3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps35Q9EQH3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps35Q9EQH3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps35Q9EQH3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps35Q9EQH3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Vps35Q9EQH3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps35Q9EQH3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps35Q9EQH3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps35Q9EQH3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.86■□□□□ 0.77
Vps35Q9EQH3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Vps35Q9EQH3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps35Q9EQH3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps35Q9EQH3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Vps35Q9EQH3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps35Q9EQH3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps35Q9EQH3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Vps35Q9EQH3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Vps35Q9EQH3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Vps35Q9EQH3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.85■□□□□ 0.77
Vps35Q9EQH3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps35Q9EQH3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps35Q9EQH3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Vps35Q9EQH3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps35Q9EQH3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps35Q9EQH3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Vps35Q9EQH3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps35Q9EQH3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps35Q9EQH3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps35Q9EQH3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Vps35Q9EQH3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Vps35Q9EQH3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps35Q9EQH3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps35Q9EQH3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps35Q9EQH3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.84■□□□□ 0.77
Vps35Q9EQH3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Vps35Q9EQH3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps35Q9EQH3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps35Q9EQH3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps35Q9EQH3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps35Q9EQH3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.83■□□□□ 0.77
Vps35Q9EQH3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps35Q9EQH3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Vps35Q9EQH3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps35Q9EQH3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps35Q9EQH3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vps35Q9EQH3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Vps35Q9EQH3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vps35Q9EQH3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vps35Q9EQH3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps35Q9EQH3 Gm12821-201ENSMUST00000120022 600 ntBASIC19.82■□□□□ 0.76
Vps35Q9EQH3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.82■□□□□ 0.76
Vps35Q9EQH3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps35Q9EQH3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps35Q9EQH3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps35Q9EQH3 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.82■□□□□ 0.76
Vps35Q9EQH3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps35Q9EQH3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps35Q9EQH3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps35Q9EQH3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps35Q9EQH3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vps35Q9EQH3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Vps35Q9EQH3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
Vps35Q9EQH3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vps35Q9EQH3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.81■□□□□ 0.76
Vps35Q9EQH3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps35Q9EQH3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps35Q9EQH3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps35Q9EQH3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vps35Q9EQH3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Vps35Q9EQH3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps35Q9EQH3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Vps35Q9EQH3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vps35Q9EQH3 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.8■□□□□ 0.76
Vps35Q9EQH3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps35Q9EQH3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.8■□□□□ 0.76
Vps35Q9EQH3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps35Q9EQH3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps35Q9EQH3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Vps35Q9EQH3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps35Q9EQH3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.79■□□□□ 0.76
Vps35Q9EQH3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.79■□□□□ 0.76
Vps35Q9EQH3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps35Q9EQH3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Vps35Q9EQH3 Mir6236-201ENSMUST00000184437 123 ntBASIC19.79■□□□□ 0.76
Vps35Q9EQH3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.79■□□□□ 0.76
Vps35Q9EQH3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.79■□□□□ 0.76
Vps35Q9EQH3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps35Q9EQH3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms