Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp2aQ9DB34 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Chmp2aQ9DB34 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Chmp2aQ9DB34 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp2aQ9DB34 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp2aQ9DB34 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp2aQ9DB34 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp2aQ9DB34 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp2aQ9DB34 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp2aQ9DB34 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.72■□□□□ 0.91
Chmp2aQ9DB34 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp2aQ9DB34 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp2aQ9DB34 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp2aQ9DB34 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.72■□□□□ 0.91
Chmp2aQ9DB34 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.72■□□□□ 0.91
Chmp2aQ9DB34 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp2aQ9DB34 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp2aQ9DB34 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp2aQ9DB34 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp2aQ9DB34 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp2aQ9DB34 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp2aQ9DB34 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp2aQ9DB34 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
Chmp2aQ9DB34 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp2aQ9DB34 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp2aQ9DB34 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.71■□□□□ 0.91
Chmp2aQ9DB34 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp2aQ9DB34 Gm43137-201ENSMUST00000198052 594 ntBASIC20.71■□□□□ 0.91
Chmp2aQ9DB34 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp2aQ9DB34 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp2aQ9DB34 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp2aQ9DB34 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp2aQ9DB34 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp2aQ9DB34 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Chmp2aQ9DB34 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.7■□□□□ 0.9
Chmp2aQ9DB34 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp2aQ9DB34 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp2aQ9DB34 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp2aQ9DB34 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp2aQ9DB34 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp2aQ9DB34 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp2aQ9DB34 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp2aQ9DB34 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp2aQ9DB34 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.69■□□□□ 0.9
Chmp2aQ9DB34 Gm27454-201ENSMUST00000185090 204 ntBASIC20.69■□□□□ 0.9
Chmp2aQ9DB34 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Chmp2aQ9DB34 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp2aQ9DB34 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp2aQ9DB34 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp2aQ9DB34 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Chmp2aQ9DB34 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp2aQ9DB34 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp2aQ9DB34 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp2aQ9DB34 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp2aQ9DB34 Gm12821-201ENSMUST00000120022 600 ntBASIC20.68■□□□□ 0.9
Chmp2aQ9DB34 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Chmp2aQ9DB34 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.68■□□□□ 0.9
Chmp2aQ9DB34 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Chmp2aQ9DB34 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Chmp2aQ9DB34 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp2aQ9DB34 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp2aQ9DB34 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.68■□□□□ 0.9
Chmp2aQ9DB34 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.68■□□□□ 0.9
Chmp2aQ9DB34 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.68■□□□□ 0.9
Chmp2aQ9DB34 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp2aQ9DB34 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp2aQ9DB34 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp2aQ9DB34 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Chmp2aQ9DB34 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp2aQ9DB34 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp2aQ9DB34 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Chmp2aQ9DB34 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.67■□□□□ 0.9
Chmp2aQ9DB34 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp2aQ9DB34 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp2aQ9DB34 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.67■□□□□ 0.9
Chmp2aQ9DB34 Gm45417-201ENSMUST00000209533 758 ntBASIC20.67■□□□□ 0.9
Chmp2aQ9DB34 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp2aQ9DB34 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp2aQ9DB34 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp2aQ9DB34 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Chmp2aQ9DB34 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp2aQ9DB34 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp2aQ9DB34 Mir6236-201ENSMUST00000184437 123 ntBASIC20.66■□□□□ 0.9
Chmp2aQ9DB34 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp2aQ9DB34 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp2aQ9DB34 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp2aQ9DB34 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.66■□□□□ 0.9
Chmp2aQ9DB34 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp2aQ9DB34 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Chmp2aQ9DB34 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp2aQ9DB34 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp2aQ9DB34 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp2aQ9DB34 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.65■□□□□ 0.9
Chmp2aQ9DB34 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Chmp2aQ9DB34 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp2aQ9DB34 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp2aQ9DB34 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp2aQ9DB34 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chmp2aQ9DB34 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chmp2aQ9DB34 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms