Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Ssmem1Q9D9Y8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ssmem1Q9D9Y8 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.2■□□□□ 0.34
Ssmem1Q9D9Y8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ssmem1Q9D9Y8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ssmem1Q9D9Y8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssmem1Q9D9Y8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssmem1Q9D9Y8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ssmem1Q9D9Y8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ssmem1Q9D9Y8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ssmem1Q9D9Y8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ssmem1Q9D9Y8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ssmem1Q9D9Y8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Ssmem1Q9D9Y8 Gm8493-201ENSMUST00000196881 489 ntBASIC17.19■□□□□ 0.34
Ssmem1Q9D9Y8 Spcs1-204ENSMUST00000226782 949 ntBASIC17.19■□□□□ 0.34
Ssmem1Q9D9Y8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ssmem1Q9D9Y8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ssmem1Q9D9Y8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ssmem1Q9D9Y8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Ssmem1Q9D9Y8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ssmem1Q9D9Y8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ssmem1Q9D9Y8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ssmem1Q9D9Y8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Ssmem1Q9D9Y8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.18■□□□□ 0.34
Ssmem1Q9D9Y8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ssmem1Q9D9Y8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ssmem1Q9D9Y8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ssmem1Q9D9Y8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ssmem1Q9D9Y8 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ssmem1Q9D9Y8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ssmem1Q9D9Y8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ssmem1Q9D9Y8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ssmem1Q9D9Y8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ssmem1Q9D9Y8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ssmem1Q9D9Y8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ssmem1Q9D9Y8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.17■□□□□ 0.34
Ssmem1Q9D9Y8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ssmem1Q9D9Y8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.17■□□□□ 0.34
Ssmem1Q9D9Y8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ssmem1Q9D9Y8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ssmem1Q9D9Y8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ssmem1Q9D9Y8 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ssmem1Q9D9Y8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ssmem1Q9D9Y8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ssmem1Q9D9Y8 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.17■□□□□ 0.34
Ssmem1Q9D9Y8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ssmem1Q9D9Y8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ssmem1Q9D9Y8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ssmem1Q9D9Y8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ssmem1Q9D9Y8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ssmem1Q9D9Y8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.16■□□□□ 0.34
Ssmem1Q9D9Y8 Gm12251-201ENSMUST00000117893 792 ntBASIC17.16■□□□□ 0.34
Ssmem1Q9D9Y8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.16■□□□□ 0.34
Ssmem1Q9D9Y8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ssmem1Q9D9Y8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ssmem1Q9D9Y8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ssmem1Q9D9Y8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ssmem1Q9D9Y8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Ssmem1Q9D9Y8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.16■□□□□ 0.34
Ssmem1Q9D9Y8 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ssmem1Q9D9Y8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ssmem1Q9D9Y8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ssmem1Q9D9Y8 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ssmem1Q9D9Y8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Ssmem1Q9D9Y8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ssmem1Q9D9Y8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ssmem1Q9D9Y8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Ssmem1Q9D9Y8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ssmem1Q9D9Y8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ssmem1Q9D9Y8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ssmem1Q9D9Y8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ssmem1Q9D9Y8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.15■□□□□ 0.34
Ssmem1Q9D9Y8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.15■□□□□ 0.34
Ssmem1Q9D9Y8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ssmem1Q9D9Y8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ssmem1Q9D9Y8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Ssmem1Q9D9Y8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssmem1Q9D9Y8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssmem1Q9D9Y8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssmem1Q9D9Y8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssmem1Q9D9Y8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssmem1Q9D9Y8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ssmem1Q9D9Y8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.14■□□□□ 0.33
Ssmem1Q9D9Y8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ssmem1Q9D9Y8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssmem1Q9D9Y8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssmem1Q9D9Y8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssmem1Q9D9Y8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssmem1Q9D9Y8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.13■□□□□ 0.33
Ssmem1Q9D9Y8 Gm43173-201ENSMUST00000202246 593 ntBASIC17.13■□□□□ 0.33
Ssmem1Q9D9Y8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssmem1Q9D9Y8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssmem1Q9D9Y8 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.13■□□□□ 0.33
Ssmem1Q9D9Y8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssmem1Q9D9Y8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssmem1Q9D9Y8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssmem1Q9D9Y8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssmem1Q9D9Y8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssmem1Q9D9Y8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssmem1Q9D9Y8 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms