Protein–RNA interactions for Protein: Q9D7J9

Echdc3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Echdc3Q9D7J9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Echdc3Q9D7J9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Echdc3Q9D7J9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Echdc3Q9D7J9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Echdc3Q9D7J9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Echdc3Q9D7J9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Echdc3Q9D7J9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Echdc3Q9D7J9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.32■□□□□ 0.68
Echdc3Q9D7J9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Echdc3Q9D7J9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.32■□□□□ 0.68
Echdc3Q9D7J9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Echdc3Q9D7J9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Echdc3Q9D7J9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Echdc3Q9D7J9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Echdc3Q9D7J9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Echdc3Q9D7J9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Echdc3Q9D7J9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Echdc3Q9D7J9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.31■□□□□ 0.68
Echdc3Q9D7J9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Echdc3Q9D7J9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Echdc3Q9D7J9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Echdc3Q9D7J9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Echdc3Q9D7J9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Echdc3Q9D7J9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Echdc3Q9D7J9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Echdc3Q9D7J9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Echdc3Q9D7J9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Echdc3Q9D7J9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.31■□□□□ 0.68
Echdc3Q9D7J9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.3■□□□□ 0.68
Echdc3Q9D7J9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.3■□□□□ 0.68
Echdc3Q9D7J9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Echdc3Q9D7J9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Echdc3Q9D7J9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Echdc3Q9D7J9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Echdc3Q9D7J9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Echdc3Q9D7J9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Echdc3Q9D7J9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Echdc3Q9D7J9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Echdc3Q9D7J9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Echdc3Q9D7J9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Echdc3Q9D7J9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Echdc3Q9D7J9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Echdc3Q9D7J9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Echdc3Q9D7J9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Echdc3Q9D7J9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Echdc3Q9D7J9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Echdc3Q9D7J9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Echdc3Q9D7J9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Echdc3Q9D7J9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Echdc3Q9D7J9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Echdc3Q9D7J9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Echdc3Q9D7J9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Echdc3Q9D7J9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Echdc3Q9D7J9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Echdc3Q9D7J9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Echdc3Q9D7J9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Echdc3Q9D7J9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Echdc3Q9D7J9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Echdc3Q9D7J9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Echdc3Q9D7J9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Echdc3Q9D7J9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Echdc3Q9D7J9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Echdc3Q9D7J9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Echdc3Q9D7J9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Echdc3Q9D7J9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.26■□□□□ 0.67
Echdc3Q9D7J9 Gm10232-201ENSMUST00000089221 720 ntBASIC19.26■□□□□ 0.67
Echdc3Q9D7J9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.26■□□□□ 0.67
Echdc3Q9D7J9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Echdc3Q9D7J9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Echdc3Q9D7J9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Echdc3Q9D7J9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Echdc3Q9D7J9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Echdc3Q9D7J9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.25■□□□□ 0.67
Echdc3Q9D7J9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.25■□□□□ 0.67
Echdc3Q9D7J9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Echdc3Q9D7J9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.25■□□□□ 0.67
Echdc3Q9D7J9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Echdc3Q9D7J9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Echdc3Q9D7J9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Echdc3Q9D7J9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Echdc3Q9D7J9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Echdc3Q9D7J9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Echdc3Q9D7J9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Echdc3Q9D7J9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Echdc3Q9D7J9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.24■□□□□ 0.67
Echdc3Q9D7J9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Echdc3Q9D7J9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Echdc3Q9D7J9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Echdc3Q9D7J9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Echdc3Q9D7J9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Echdc3Q9D7J9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.23■□□□□ 0.67
Echdc3Q9D7J9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Echdc3Q9D7J9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.23■□□□□ 0.67
Echdc3Q9D7J9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.23■□□□□ 0.67
Echdc3Q9D7J9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Echdc3Q9D7J9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Echdc3Q9D7J9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Echdc3Q9D7J9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Echdc3Q9D7J9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Echdc3Q9D7J9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms