Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Nop56Q9D6Z1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.48■□□□□ 0.87
Nop56Q9D6Z1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nop56Q9D6Z1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Nop56Q9D6Z1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nop56Q9D6Z1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nop56Q9D6Z1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nop56Q9D6Z1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nop56Q9D6Z1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nop56Q9D6Z1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nop56Q9D6Z1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nop56Q9D6Z1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nop56Q9D6Z1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nop56Q9D6Z1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nop56Q9D6Z1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
Nop56Q9D6Z1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nop56Q9D6Z1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nop56Q9D6Z1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nop56Q9D6Z1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Nop56Q9D6Z1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nop56Q9D6Z1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nop56Q9D6Z1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Nop56Q9D6Z1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nop56Q9D6Z1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nop56Q9D6Z1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.46■□□□□ 0.87
Nop56Q9D6Z1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nop56Q9D6Z1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Nop56Q9D6Z1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nop56Q9D6Z1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.46■□□□□ 0.87
Nop56Q9D6Z1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nop56Q9D6Z1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nop56Q9D6Z1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.45■□□□□ 0.86
Nop56Q9D6Z1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nop56Q9D6Z1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Nop56Q9D6Z1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.45■□□□□ 0.86
Nop56Q9D6Z1 Gm12366-201ENSMUST00000121722 873 ntBASIC20.45■□□□□ 0.86
Nop56Q9D6Z1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.45■□□□□ 0.86
Nop56Q9D6Z1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.45■□□□□ 0.86
Nop56Q9D6Z1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nop56Q9D6Z1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.45■□□□□ 0.86
Nop56Q9D6Z1 Gm5786-201ENSMUST00000085368 882 ntBASIC20.45■□□□□ 0.86
Nop56Q9D6Z1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nop56Q9D6Z1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nop56Q9D6Z1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Nop56Q9D6Z1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nop56Q9D6Z1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nop56Q9D6Z1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
Nop56Q9D6Z1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nop56Q9D6Z1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nop56Q9D6Z1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Nop56Q9D6Z1 Mir6538-201ENSMUST00000183713 110 ntBASIC20.44■□□□□ 0.86
Nop56Q9D6Z1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nop56Q9D6Z1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nop56Q9D6Z1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nop56Q9D6Z1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nop56Q9D6Z1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Nop56Q9D6Z1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.43■□□□□ 0.86
Nop56Q9D6Z1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.43■□□□□ 0.86
Nop56Q9D6Z1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nop56Q9D6Z1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.43■□□□□ 0.86
Nop56Q9D6Z1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nop56Q9D6Z1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Nop56Q9D6Z1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nop56Q9D6Z1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Nop56Q9D6Z1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nop56Q9D6Z1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nop56Q9D6Z1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Nop56Q9D6Z1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Nop56Q9D6Z1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Nop56Q9D6Z1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nop56Q9D6Z1 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.42■□□□□ 0.86
Nop56Q9D6Z1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nop56Q9D6Z1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Nop56Q9D6Z1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nop56Q9D6Z1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Nop56Q9D6Z1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nop56Q9D6Z1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nop56Q9D6Z1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nop56Q9D6Z1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.41■□□□□ 0.86
Nop56Q9D6Z1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Nop56Q9D6Z1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nop56Q9D6Z1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nop56Q9D6Z1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nop56Q9D6Z1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Nop56Q9D6Z1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Nop56Q9D6Z1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nop56Q9D6Z1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Nop56Q9D6Z1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nop56Q9D6Z1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nop56Q9D6Z1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nop56Q9D6Z1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nop56Q9D6Z1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Nop56Q9D6Z1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nop56Q9D6Z1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nop56Q9D6Z1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nop56Q9D6Z1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nop56Q9D6Z1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nop56Q9D6Z1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Nop56Q9D6Z1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.39■□□□□ 0.85
Nop56Q9D6Z1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms