Protein–RNA interactions for Protein: Q9D413

Sh2d6, SH2 domain-containing protein 6, mousemouse

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d6Q9D413 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sh2d6Q9D413 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sh2d6Q9D413 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh2d6Q9D413 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh2d6Q9D413 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Sh2d6Q9D413 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Sh2d6Q9D413 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh2d6Q9D413 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Sh2d6Q9D413 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sh2d6Q9D413 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Sh2d6Q9D413 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sh2d6Q9D413 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sh2d6Q9D413 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Sh2d6Q9D413 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh2d6Q9D413 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sh2d6Q9D413 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sh2d6Q9D413 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sh2d6Q9D413 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sh2d6Q9D413 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2d6Q9D413 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2d6Q9D413 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2d6Q9D413 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2d6Q9D413 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2d6Q9D413 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2d6Q9D413 Mir7075-201ENSMUST00000184187 82 ntBASIC16.51■□□□□ 0.23
Sh2d6Q9D413 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2d6Q9D413 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2d6Q9D413 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Sh2d6Q9D413 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2d6Q9D413 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2d6Q9D413 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2d6Q9D413 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh2d6Q9D413 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh2d6Q9D413 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh2d6Q9D413 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Sh2d6Q9D413 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.5■□□□□ 0.23
Sh2d6Q9D413 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Sh2d6Q9D413 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.5■□□□□ 0.23
Sh2d6Q9D413 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh2d6Q9D413 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh2d6Q9D413 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh2d6Q9D413 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh2d6Q9D413 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sh2d6Q9D413 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Sh2d6Q9D413 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh2d6Q9D413 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh2d6Q9D413 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Sh2d6Q9D413 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh2d6Q9D413 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh2d6Q9D413 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh2d6Q9D413 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh2d6Q9D413 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh2d6Q9D413 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh2d6Q9D413 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh2d6Q9D413 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.48■□□□□ 0.23
Sh2d6Q9D413 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh2d6Q9D413 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.48■□□□□ 0.23
Sh2d6Q9D413 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Sh2d6Q9D413 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Sh2d6Q9D413 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sh2d6Q9D413 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sh2d6Q9D413 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Sh2d6Q9D413 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh2d6Q9D413 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sh2d6Q9D413 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh2d6Q9D413 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2d6Q9D413 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2d6Q9D413 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2d6Q9D413 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2d6Q9D413 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2d6Q9D413 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Sh2d6Q9D413 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2d6Q9D413 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.47■□□□□ 0.23
Sh2d6Q9D413 Gm12251-201ENSMUST00000117893 792 ntBASIC16.47■□□□□ 0.23
Sh2d6Q9D413 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Sh2d6Q9D413 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2d6Q9D413 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Sh2d6Q9D413 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.47■□□□□ 0.23
Sh2d6Q9D413 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.47■□□□□ 0.23
Sh2d6Q9D413 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Sh2d6Q9D413 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2d6Q9D413 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.47■□□□□ 0.23
Sh2d6Q9D413 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2d6Q9D413 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Sh2d6Q9D413 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh2d6Q9D413 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sh2d6Q9D413 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh2d6Q9D413 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh2d6Q9D413 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sh2d6Q9D413 Gm8493-201ENSMUST00000196881 489 ntBASIC16.46■□□□□ 0.23
Sh2d6Q9D413 Spcs1-204ENSMUST00000226782 949 ntBASIC16.46■□□□□ 0.23
Sh2d6Q9D413 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Sh2d6Q9D413 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh2d6Q9D413 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh2d6Q9D413 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh2d6Q9D413 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sh2d6Q9D413 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Sh2d6Q9D413 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.45■□□□□ 0.22
Sh2d6Q9D413 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh2d6Q9D413 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms