Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Upk1aQ9D132 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Upk1aQ9D132 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Upk1aQ9D132 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.95■□□□□ 0.62
Upk1aQ9D132 Gm45444-201ENSMUST00000211394 898 ntBASIC18.95■□□□□ 0.62
Upk1aQ9D132 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.95■□□□□ 0.62
Upk1aQ9D132 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.95■□□□□ 0.62
Upk1aQ9D132 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Upk1aQ9D132 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Upk1aQ9D132 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Upk1aQ9D132 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Upk1aQ9D132 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Upk1aQ9D132 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.94■□□□□ 0.62
Upk1aQ9D132 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.94■□□□□ 0.62
Upk1aQ9D132 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Upk1aQ9D132 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Upk1aQ9D132 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Upk1aQ9D132 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Upk1aQ9D132 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.94■□□□□ 0.62
Upk1aQ9D132 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Upk1aQ9D132 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Upk1aQ9D132 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Upk1aQ9D132 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Upk1aQ9D132 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Upk1aQ9D132 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Upk1aQ9D132 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Upk1aQ9D132 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Upk1aQ9D132 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Upk1aQ9D132 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Upk1aQ9D132 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Upk1aQ9D132 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Upk1aQ9D132 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Upk1aQ9D132 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.92■□□□□ 0.62
Upk1aQ9D132 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Upk1aQ9D132 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Upk1aQ9D132 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Upk1aQ9D132 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Upk1aQ9D132 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Upk1aQ9D132 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Upk1aQ9D132 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Upk1aQ9D132 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Upk1aQ9D132 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Upk1aQ9D132 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.91■□□□□ 0.62
Upk1aQ9D132 Gm13238-201ENSMUST00000117655 780 ntBASIC18.91■□□□□ 0.62
Upk1aQ9D132 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Upk1aQ9D132 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Upk1aQ9D132 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Upk1aQ9D132 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Upk1aQ9D132 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Upk1aQ9D132 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Upk1aQ9D132 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Upk1aQ9D132 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Upk1aQ9D132 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Upk1aQ9D132 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Upk1aQ9D132 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Upk1aQ9D132 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Upk1aQ9D132 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Upk1aQ9D132 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Upk1aQ9D132 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Upk1aQ9D132 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Upk1aQ9D132 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Upk1aQ9D132 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Upk1aQ9D132 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.89■□□□□ 0.61
Upk1aQ9D132 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Upk1aQ9D132 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Upk1aQ9D132 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upk1aQ9D132 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upk1aQ9D132 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upk1aQ9D132 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Upk1aQ9D132 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Upk1aQ9D132 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.88■□□□□ 0.61
Upk1aQ9D132 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upk1aQ9D132 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Upk1aQ9D132 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Upk1aQ9D132 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Upk1aQ9D132 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Upk1aQ9D132 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Upk1aQ9D132 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Upk1aQ9D132 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Upk1aQ9D132 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Upk1aQ9D132 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upk1aQ9D132 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Upk1aQ9D132 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upk1aQ9D132 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upk1aQ9D132 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upk1aQ9D132 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Upk1aQ9D132 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Upk1aQ9D132 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.86■□□□□ 0.61
Upk1aQ9D132 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upk1aQ9D132 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upk1aQ9D132 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Upk1aQ9D132 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Upk1aQ9D132 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upk1aQ9D132 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Upk1aQ9D132 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.85■□□□□ 0.61
Upk1aQ9D132 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Upk1aQ9D132 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Upk1aQ9D132 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Upk1aQ9D132 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.85■□□□□ 0.61
Upk1aQ9D132 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms