Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Mms19Q9D071 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mms19Q9D071 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Mms19Q9D071 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mms19Q9D071 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Mms19Q9D071 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mms19Q9D071 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Mms19Q9D071 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.25■□□□□ 0.99
Mms19Q9D071 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mms19Q9D071 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Mms19Q9D071 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
Mms19Q9D071 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mms19Q9D071 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Mms19Q9D071 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Mms19Q9D071 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mms19Q9D071 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mms19Q9D071 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Mms19Q9D071 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mms19Q9D071 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mms19Q9D071 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Mms19Q9D071 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mms19Q9D071 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.24■□□□□ 0.99
Mms19Q9D071 Mir6236-201ENSMUST00000184437 123 ntBASIC21.24■□□□□ 0.99
Mms19Q9D071 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Mms19Q9D071 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
Mms19Q9D071 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Mms19Q9D071 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Mms19Q9D071 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mms19Q9D071 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mms19Q9D071 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Mms19Q9D071 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Mms19Q9D071 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.23■□□□□ 0.99
Mms19Q9D071 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.23■□□□□ 0.99
Mms19Q9D071 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Mms19Q9D071 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mms19Q9D071 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Mms19Q9D071 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Mms19Q9D071 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mms19Q9D071 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mms19Q9D071 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.22■□□□□ 0.99
Mms19Q9D071 Mir7075-201ENSMUST00000184187 82 ntBASIC21.22■□□□□ 0.99
Mms19Q9D071 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Mms19Q9D071 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Mms19Q9D071 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Mms19Q9D071 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Mms19Q9D071 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Mms19Q9D071 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Mms19Q9D071 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.21■□□□□ 0.99
Mms19Q9D071 Gm6139-201ENSMUST00000079261 882 ntBASIC21.21■□□□□ 0.99
Mms19Q9D071 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Mms19Q9D071 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mms19Q9D071 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
Mms19Q9D071 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Mms19Q9D071 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mms19Q9D071 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Mms19Q9D071 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mms19Q9D071 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Mms19Q9D071 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.2■□□□□ 0.98
Mms19Q9D071 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mms19Q9D071 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mms19Q9D071 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mms19Q9D071 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Mms19Q9D071 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mms19Q9D071 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mms19Q9D071 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mms19Q9D071 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mms19Q9D071 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Mms19Q9D071 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mms19Q9D071 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Mms19Q9D071 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mms19Q9D071 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mms19Q9D071 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mms19Q9D071 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Mms19Q9D071 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Mms19Q9D071 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mms19Q9D071 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
Mms19Q9D071 Serp2-204ENSMUST00000228055 705 ntBASIC21.18■□□□□ 0.98
Mms19Q9D071 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mms19Q9D071 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Mms19Q9D071 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mms19Q9D071 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mms19Q9D071 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Mms19Q9D071 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Mms19Q9D071 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mms19Q9D071 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mms19Q9D071 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mms19Q9D071 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mms19Q9D071 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mms19Q9D071 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Mms19Q9D071 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Mms19Q9D071 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mms19Q9D071 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mms19Q9D071 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Mms19Q9D071 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mms19Q9D071 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mms19Q9D071 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mms19Q9D071 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Mms19Q9D071 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mms19Q9D071 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Mms19Q9D071 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms