Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shmt2Q9CZN7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.99■□□□□ 0.63
Shmt2Q9CZN7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Shmt2Q9CZN7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shmt2Q9CZN7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Shmt2Q9CZN7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.99■□□□□ 0.63
Shmt2Q9CZN7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.99■□□□□ 0.63
Shmt2Q9CZN7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shmt2Q9CZN7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shmt2Q9CZN7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shmt2Q9CZN7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shmt2Q9CZN7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shmt2Q9CZN7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.98■□□□□ 0.63
Shmt2Q9CZN7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Shmt2Q9CZN7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.98■□□□□ 0.63
Shmt2Q9CZN7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Shmt2Q9CZN7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shmt2Q9CZN7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shmt2Q9CZN7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
Shmt2Q9CZN7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shmt2Q9CZN7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.97■□□□□ 0.63
Shmt2Q9CZN7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shmt2Q9CZN7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.97■□□□□ 0.63
Shmt2Q9CZN7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Shmt2Q9CZN7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shmt2Q9CZN7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.97■□□□□ 0.63
Shmt2Q9CZN7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shmt2Q9CZN7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Shmt2Q9CZN7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Shmt2Q9CZN7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.97■□□□□ 0.63
Shmt2Q9CZN7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.96■□□□□ 0.63
Shmt2Q9CZN7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Shmt2Q9CZN7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Shmt2Q9CZN7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Shmt2Q9CZN7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Shmt2Q9CZN7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
Shmt2Q9CZN7 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Shmt2Q9CZN7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Shmt2Q9CZN7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Shmt2Q9CZN7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Shmt2Q9CZN7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Shmt2Q9CZN7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Shmt2Q9CZN7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shmt2Q9CZN7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shmt2Q9CZN7 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Shmt2Q9CZN7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.95■□□□□ 0.62
Shmt2Q9CZN7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shmt2Q9CZN7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Shmt2Q9CZN7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.95■□□□□ 0.62
Shmt2Q9CZN7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shmt2Q9CZN7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shmt2Q9CZN7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.95■□□□□ 0.62
Shmt2Q9CZN7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Shmt2Q9CZN7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.95■□□□□ 0.62
Shmt2Q9CZN7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shmt2Q9CZN7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shmt2Q9CZN7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Shmt2Q9CZN7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shmt2Q9CZN7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Shmt2Q9CZN7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shmt2Q9CZN7 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shmt2Q9CZN7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Shmt2Q9CZN7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shmt2Q9CZN7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shmt2Q9CZN7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Shmt2Q9CZN7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shmt2Q9CZN7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Shmt2Q9CZN7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shmt2Q9CZN7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shmt2Q9CZN7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.93■□□□□ 0.62
Shmt2Q9CZN7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shmt2Q9CZN7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.93■□□□□ 0.62
Shmt2Q9CZN7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
Shmt2Q9CZN7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shmt2Q9CZN7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shmt2Q9CZN7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shmt2Q9CZN7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Shmt2Q9CZN7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shmt2Q9CZN7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shmt2Q9CZN7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shmt2Q9CZN7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shmt2Q9CZN7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.91■□□□□ 0.62
Shmt2Q9CZN7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shmt2Q9CZN7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Shmt2Q9CZN7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shmt2Q9CZN7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Shmt2Q9CZN7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shmt2Q9CZN7 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Shmt2Q9CZN7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shmt2Q9CZN7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shmt2Q9CZN7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Shmt2Q9CZN7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shmt2Q9CZN7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Shmt2Q9CZN7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.91■□□□□ 0.62
Shmt2Q9CZN7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Shmt2Q9CZN7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shmt2Q9CZN7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.9■□□□□ 0.62
Shmt2Q9CZN7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shmt2Q9CZN7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shmt2Q9CZN7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms