Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Trim13Q9CYB0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim13Q9CYB0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.37■□□□□ 0.53
Trim13Q9CYB0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim13Q9CYB0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trim13Q9CYB0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.37■□□□□ 0.53
Trim13Q9CYB0 Gm10420-201ENSMUST00000121713 882 ntBASIC18.36■□□□□ 0.53
Trim13Q9CYB0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim13Q9CYB0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim13Q9CYB0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Trim13Q9CYB0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim13Q9CYB0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim13Q9CYB0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trim13Q9CYB0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim13Q9CYB0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim13Q9CYB0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim13Q9CYB0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trim13Q9CYB0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trim13Q9CYB0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim13Q9CYB0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim13Q9CYB0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim13Q9CYB0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim13Q9CYB0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trim13Q9CYB0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.35■□□□□ 0.53
Trim13Q9CYB0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim13Q9CYB0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim13Q9CYB0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim13Q9CYB0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim13Q9CYB0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim13Q9CYB0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim13Q9CYB0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim13Q9CYB0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.34■□□□□ 0.53
Trim13Q9CYB0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim13Q9CYB0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Trim13Q9CYB0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim13Q9CYB0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim13Q9CYB0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim13Q9CYB0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim13Q9CYB0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Trim13Q9CYB0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.33■□□□□ 0.52
Trim13Q9CYB0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.33■□□□□ 0.52
Trim13Q9CYB0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim13Q9CYB0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim13Q9CYB0 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.33■□□□□ 0.52
Trim13Q9CYB0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim13Q9CYB0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim13Q9CYB0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim13Q9CYB0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.32■□□□□ 0.52
Trim13Q9CYB0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim13Q9CYB0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trim13Q9CYB0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Trim13Q9CYB0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim13Q9CYB0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim13Q9CYB0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim13Q9CYB0 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim13Q9CYB0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim13Q9CYB0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.32■□□□□ 0.52
Trim13Q9CYB0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim13Q9CYB0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim13Q9CYB0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trim13Q9CYB0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim13Q9CYB0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.32■□□□□ 0.52
Trim13Q9CYB0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Trim13Q9CYB0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim13Q9CYB0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim13Q9CYB0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim13Q9CYB0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim13Q9CYB0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim13Q9CYB0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Trim13Q9CYB0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.31■□□□□ 0.52
Trim13Q9CYB0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim13Q9CYB0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim13Q9CYB0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim13Q9CYB0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.31■□□□□ 0.52
Trim13Q9CYB0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim13Q9CYB0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim13Q9CYB0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trim13Q9CYB0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Trim13Q9CYB0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim13Q9CYB0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim13Q9CYB0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim13Q9CYB0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim13Q9CYB0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim13Q9CYB0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim13Q9CYB0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
Trim13Q9CYB0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.3■□□□□ 0.52
Trim13Q9CYB0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trim13Q9CYB0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim13Q9CYB0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim13Q9CYB0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim13Q9CYB0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim13Q9CYB0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim13Q9CYB0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim13Q9CYB0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim13Q9CYB0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim13Q9CYB0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim13Q9CYB0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim13Q9CYB0 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim13Q9CYB0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim13Q9CYB0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms