Protein–RNA interactions for Protein: Q9CWN7

Cnot11, CCR4-NOT transcription complex subunit 11, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot11Q9CWN7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cnot11Q9CWN7 Gm22238-201ENSMUST00000175222 88 ntBASIC19.36■□□□□ 0.69
Cnot11Q9CWN7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cnot11Q9CWN7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cnot11Q9CWN7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cnot11Q9CWN7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cnot11Q9CWN7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cnot11Q9CWN7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cnot11Q9CWN7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.36■□□□□ 0.69
Cnot11Q9CWN7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cnot11Q9CWN7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.36■□□□□ 0.69
Cnot11Q9CWN7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Cnot11Q9CWN7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cnot11Q9CWN7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.35■□□□□ 0.69
Cnot11Q9CWN7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.35■□□□□ 0.69
Cnot11Q9CWN7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Cnot11Q9CWN7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cnot11Q9CWN7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cnot11Q9CWN7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cnot11Q9CWN7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Cnot11Q9CWN7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cnot11Q9CWN7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cnot11Q9CWN7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Cnot11Q9CWN7 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cnot11Q9CWN7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
Cnot11Q9CWN7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cnot11Q9CWN7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cnot11Q9CWN7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cnot11Q9CWN7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.68
Cnot11Q9CWN7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.33■□□□□ 0.68
Cnot11Q9CWN7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Cnot11Q9CWN7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Cnot11Q9CWN7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cnot11Q9CWN7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Cnot11Q9CWN7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cnot11Q9CWN7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cnot11Q9CWN7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cnot11Q9CWN7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnot11Q9CWN7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cnot11Q9CWN7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnot11Q9CWN7 Gm7143-201ENSMUST00000222811 859 ntBASIC19.32■□□□□ 0.68
Cnot11Q9CWN7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Cnot11Q9CWN7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnot11Q9CWN7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnot11Q9CWN7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnot11Q9CWN7 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.31■□□□□ 0.68
Cnot11Q9CWN7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cnot11Q9CWN7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.31■□□□□ 0.68
Cnot11Q9CWN7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cnot11Q9CWN7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cnot11Q9CWN7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.31■□□□□ 0.68
Cnot11Q9CWN7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cnot11Q9CWN7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cnot11Q9CWN7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cnot11Q9CWN7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Cnot11Q9CWN7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.3■□□□□ 0.68
Cnot11Q9CWN7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cnot11Q9CWN7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.3■□□□□ 0.68
Cnot11Q9CWN7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cnot11Q9CWN7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cnot11Q9CWN7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Cnot11Q9CWN7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cnot11Q9CWN7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
Cnot11Q9CWN7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cnot11Q9CWN7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cnot11Q9CWN7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.29■□□□□ 0.68
Cnot11Q9CWN7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cnot11Q9CWN7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.29■□□□□ 0.68
Cnot11Q9CWN7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.29■□□□□ 0.68
Cnot11Q9CWN7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cnot11Q9CWN7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cnot11Q9CWN7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cnot11Q9CWN7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.29■□□□□ 0.68
Cnot11Q9CWN7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cnot11Q9CWN7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cnot11Q9CWN7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cnot11Q9CWN7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cnot11Q9CWN7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cnot11Q9CWN7 Gm9870-201ENSMUST00000063874 645 ntBASIC19.28■□□□□ 0.68
Cnot11Q9CWN7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.28■□□□□ 0.68
Cnot11Q9CWN7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cnot11Q9CWN7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cnot11Q9CWN7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cnot11Q9CWN7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cnot11Q9CWN7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cnot11Q9CWN7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cnot11Q9CWN7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cnot11Q9CWN7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cnot11Q9CWN7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cnot11Q9CWN7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cnot11Q9CWN7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cnot11Q9CWN7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.27■□□□□ 0.68
Cnot11Q9CWN7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cnot11Q9CWN7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cnot11Q9CWN7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Cnot11Q9CWN7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Cnot11Q9CWN7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cnot11Q9CWN7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cnot11Q9CWN7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cnot11Q9CWN7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms