Protein–RNA interactions for Protein: Q9CUH1

4930553M12Rik, RIKEN cDNA 4930553M12 gene (Fragment), mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4930553M12RikQ9CUH1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
4930553M12RikQ9CUH1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
4930553M12RikQ9CUH1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
4930553M12RikQ9CUH1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
4930553M12RikQ9CUH1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
4930553M12RikQ9CUH1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
4930553M12RikQ9CUH1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
4930553M12RikQ9CUH1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.68■□□□□ 0.58
4930553M12RikQ9CUH1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
4930553M12RikQ9CUH1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.68■□□□□ 0.58
4930553M12RikQ9CUH1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
4930553M12RikQ9CUH1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
4930553M12RikQ9CUH1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
4930553M12RikQ9CUH1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
4930553M12RikQ9CUH1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
4930553M12RikQ9CUH1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
4930553M12RikQ9CUH1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
4930553M12RikQ9CUH1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
4930553M12RikQ9CUH1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
4930553M12RikQ9CUH1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
4930553M12RikQ9CUH1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
4930553M12RikQ9CUH1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
4930553M12RikQ9CUH1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
4930553M12RikQ9CUH1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
4930553M12RikQ9CUH1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.66■□□□□ 0.58
4930553M12RikQ9CUH1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
4930553M12RikQ9CUH1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
4930553M12RikQ9CUH1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
4930553M12RikQ9CUH1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
4930553M12RikQ9CUH1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
4930553M12RikQ9CUH1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.66■□□□□ 0.58
4930553M12RikQ9CUH1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.66■□□□□ 0.58
4930553M12RikQ9CUH1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
4930553M12RikQ9CUH1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
4930553M12RikQ9CUH1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
4930553M12RikQ9CUH1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.66■□□□□ 0.58
4930553M12RikQ9CUH1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
4930553M12RikQ9CUH1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
4930553M12RikQ9CUH1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
4930553M12RikQ9CUH1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
4930553M12RikQ9CUH1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
4930553M12RikQ9CUH1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
4930553M12RikQ9CUH1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
4930553M12RikQ9CUH1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
4930553M12RikQ9CUH1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.65■□□□□ 0.58
4930553M12RikQ9CUH1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
4930553M12RikQ9CUH1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
4930553M12RikQ9CUH1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
4930553M12RikQ9CUH1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
4930553M12RikQ9CUH1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
4930553M12RikQ9CUH1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
4930553M12RikQ9CUH1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
4930553M12RikQ9CUH1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
4930553M12RikQ9CUH1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.64■□□□□ 0.57
4930553M12RikQ9CUH1 Gm12821-201ENSMUST00000120022 600 ntBASIC18.64■□□□□ 0.57
4930553M12RikQ9CUH1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
4930553M12RikQ9CUH1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
4930553M12RikQ9CUH1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
4930553M12RikQ9CUH1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
4930553M12RikQ9CUH1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
4930553M12RikQ9CUH1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
4930553M12RikQ9CUH1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
4930553M12RikQ9CUH1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
4930553M12RikQ9CUH1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
4930553M12RikQ9CUH1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
4930553M12RikQ9CUH1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
4930553M12RikQ9CUH1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
4930553M12RikQ9CUH1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
4930553M12RikQ9CUH1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
4930553M12RikQ9CUH1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.63■□□□□ 0.57
4930553M12RikQ9CUH1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
4930553M12RikQ9CUH1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
4930553M12RikQ9CUH1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
4930553M12RikQ9CUH1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
4930553M12RikQ9CUH1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
4930553M12RikQ9CUH1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
4930553M12RikQ9CUH1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.62■□□□□ 0.57
4930553M12RikQ9CUH1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
4930553M12RikQ9CUH1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
4930553M12RikQ9CUH1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
4930553M12RikQ9CUH1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
4930553M12RikQ9CUH1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
4930553M12RikQ9CUH1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
4930553M12RikQ9CUH1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
4930553M12RikQ9CUH1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
4930553M12RikQ9CUH1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
4930553M12RikQ9CUH1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
4930553M12RikQ9CUH1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
4930553M12RikQ9CUH1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
4930553M12RikQ9CUH1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
4930553M12RikQ9CUH1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
4930553M12RikQ9CUH1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
4930553M12RikQ9CUH1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
4930553M12RikQ9CUH1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
4930553M12RikQ9CUH1 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.61■□□□□ 0.57
4930553M12RikQ9CUH1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
4930553M12RikQ9CUH1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
4930553M12RikQ9CUH1 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.61■□□□□ 0.57
4930553M12RikQ9CUH1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
4930553M12RikQ9CUH1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms