Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retreg3Q9CQV4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retreg3Q9CQV4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retreg3Q9CQV4 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.04■□□□□ 0.8
Retreg3Q9CQV4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retreg3Q9CQV4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retreg3Q9CQV4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retreg3Q9CQV4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
Retreg3Q9CQV4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retreg3Q9CQV4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retreg3Q9CQV4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.04■□□□□ 0.8
Retreg3Q9CQV4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retreg3Q9CQV4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retreg3Q9CQV4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retreg3Q9CQV4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Retreg3Q9CQV4 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retreg3Q9CQV4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retreg3Q9CQV4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retreg3Q9CQV4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retreg3Q9CQV4 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.03■□□□□ 0.8
Retreg3Q9CQV4 Gm45417-201ENSMUST00000209533 758 ntBASIC20.03■□□□□ 0.8
Retreg3Q9CQV4 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retreg3Q9CQV4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retreg3Q9CQV4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Retreg3Q9CQV4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.03■□□□□ 0.8
Retreg3Q9CQV4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.02■□□□□ 0.8
Retreg3Q9CQV4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.02■□□□□ 0.8
Retreg3Q9CQV4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.02■□□□□ 0.8
Retreg3Q9CQV4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.02■□□□□ 0.8
Retreg3Q9CQV4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retreg3Q9CQV4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.02■□□□□ 0.8
Retreg3Q9CQV4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retreg3Q9CQV4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retreg3Q9CQV4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Retreg3Q9CQV4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retreg3Q9CQV4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retreg3Q9CQV4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retreg3Q9CQV4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retreg3Q9CQV4 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retreg3Q9CQV4 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.01■□□□□ 0.79
Retreg3Q9CQV4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retreg3Q9CQV4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retreg3Q9CQV4 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.01■□□□□ 0.79
Retreg3Q9CQV4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retreg3Q9CQV4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retreg3Q9CQV4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retreg3Q9CQV4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.01■□□□□ 0.79
Retreg3Q9CQV4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20■□□□□ 0.79
Retreg3Q9CQV4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Retreg3Q9CQV4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retreg3Q9CQV4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Retreg3Q9CQV4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retreg3Q9CQV4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retreg3Q9CQV4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Retreg3Q9CQV4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retreg3Q9CQV4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retreg3Q9CQV4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retreg3Q9CQV4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retreg3Q9CQV4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retreg3Q9CQV4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.99■□□□□ 0.79
Retreg3Q9CQV4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.99■□□□□ 0.79
Retreg3Q9CQV4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retreg3Q9CQV4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retreg3Q9CQV4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retreg3Q9CQV4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Retreg3Q9CQV4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retreg3Q9CQV4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Retreg3Q9CQV4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retreg3Q9CQV4 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.99■□□□□ 0.79
Retreg3Q9CQV4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Retreg3Q9CQV4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Retreg3Q9CQV4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Retreg3Q9CQV4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Retreg3Q9CQV4 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retreg3Q9CQV4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.98■□□□□ 0.79
Retreg3Q9CQV4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
Retreg3Q9CQV4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retreg3Q9CQV4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retreg3Q9CQV4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retreg3Q9CQV4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retreg3Q9CQV4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retreg3Q9CQV4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Retreg3Q9CQV4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retreg3Q9CQV4 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.97■□□□□ 0.79
Retreg3Q9CQV4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.97■□□□□ 0.79
Retreg3Q9CQV4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retreg3Q9CQV4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.97■□□□□ 0.79
Retreg3Q9CQV4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retreg3Q9CQV4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retreg3Q9CQV4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retreg3Q9CQV4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Retreg3Q9CQV4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retreg3Q9CQV4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Retreg3Q9CQV4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retreg3Q9CQV4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retreg3Q9CQV4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.96■□□□□ 0.79
Retreg3Q9CQV4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Retreg3Q9CQV4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.96■□□□□ 0.79
Retreg3Q9CQV4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.96■□□□□ 0.79
Retreg3Q9CQV4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms