Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trim16Q99PP9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim16Q99PP9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim16Q99PP9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim16Q99PP9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.35■□□□□ 0.69
Trim16Q99PP9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.35■□□□□ 0.69
Trim16Q99PP9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Trim16Q99PP9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim16Q99PP9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim16Q99PP9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim16Q99PP9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Trim16Q99PP9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Trim16Q99PP9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim16Q99PP9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim16Q99PP9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Trim16Q99PP9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim16Q99PP9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trim16Q99PP9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.34■□□□□ 0.69
Trim16Q99PP9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
Trim16Q99PP9 Gm7143-201ENSMUST00000222811 859 ntBASIC19.34■□□□□ 0.69
Trim16Q99PP9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim16Q99PP9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim16Q99PP9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim16Q99PP9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim16Q99PP9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.33■□□□□ 0.69
Trim16Q99PP9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim16Q99PP9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim16Q99PP9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trim16Q99PP9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.33■□□□□ 0.69
Trim16Q99PP9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.33■□□□□ 0.68
Trim16Q99PP9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.33■□□□□ 0.68
Trim16Q99PP9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim16Q99PP9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Trim16Q99PP9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.33■□□□□ 0.68
Trim16Q99PP9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim16Q99PP9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim16Q99PP9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim16Q99PP9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim16Q99PP9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.33■□□□□ 0.68
Trim16Q99PP9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Trim16Q99PP9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim16Q99PP9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trim16Q99PP9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim16Q99PP9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim16Q99PP9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trim16Q99PP9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim16Q99PP9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim16Q99PP9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim16Q99PP9 Gm9870-201ENSMUST00000063874 645 ntBASIC19.32■□□□□ 0.68
Trim16Q99PP9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim16Q99PP9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim16Q99PP9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim16Q99PP9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Trim16Q99PP9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim16Q99PP9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim16Q99PP9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.31■□□□□ 0.68
Trim16Q99PP9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim16Q99PP9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim16Q99PP9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim16Q99PP9 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.31■□□□□ 0.68
Trim16Q99PP9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.31■□□□□ 0.68
Trim16Q99PP9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim16Q99PP9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim16Q99PP9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Trim16Q99PP9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
Trim16Q99PP9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim16Q99PP9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim16Q99PP9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Trim16Q99PP9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim16Q99PP9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim16Q99PP9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim16Q99PP9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.3■□□□□ 0.68
Trim16Q99PP9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim16Q99PP9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trim16Q99PP9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim16Q99PP9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim16Q99PP9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim16Q99PP9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.29■□□□□ 0.68
Trim16Q99PP9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim16Q99PP9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Trim16Q99PP9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim16Q99PP9 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.29■□□□□ 0.68
Trim16Q99PP9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim16Q99PP9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim16Q99PP9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim16Q99PP9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim16Q99PP9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim16Q99PP9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim16Q99PP9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim16Q99PP9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Trim16Q99PP9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim16Q99PP9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim16Q99PP9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim16Q99PP9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim16Q99PP9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim16Q99PP9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim16Q99PP9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.26■□□□□ 0.67
Trim16Q99PP9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim16Q99PP9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim16Q99PP9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms