Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Trim8Q99PJ2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim8Q99PJ2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim8Q99PJ2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim8Q99PJ2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.48■□□□□ 0.71
Trim8Q99PJ2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim8Q99PJ2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim8Q99PJ2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim8Q99PJ2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Trim8Q99PJ2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim8Q99PJ2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim8Q99PJ2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim8Q99PJ2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim8Q99PJ2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim8Q99PJ2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trim8Q99PJ2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim8Q99PJ2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim8Q99PJ2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Trim8Q99PJ2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Trim8Q99PJ2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim8Q99PJ2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim8Q99PJ2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim8Q99PJ2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim8Q99PJ2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim8Q99PJ2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim8Q99PJ2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim8Q99PJ2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Trim8Q99PJ2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim8Q99PJ2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.45■□□□□ 0.7
Trim8Q99PJ2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim8Q99PJ2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim8Q99PJ2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim8Q99PJ2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.45■□□□□ 0.7
Trim8Q99PJ2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.44■□□□□ 0.7
Trim8Q99PJ2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
Trim8Q99PJ2 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.44■□□□□ 0.7
Trim8Q99PJ2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim8Q99PJ2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Trim8Q99PJ2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.44■□□□□ 0.7
Trim8Q99PJ2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim8Q99PJ2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim8Q99PJ2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim8Q99PJ2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.43■□□□□ 0.7
Trim8Q99PJ2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim8Q99PJ2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim8Q99PJ2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Trim8Q99PJ2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.43■□□□□ 0.7
Trim8Q99PJ2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim8Q99PJ2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim8Q99PJ2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim8Q99PJ2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim8Q99PJ2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trim8Q99PJ2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim8Q99PJ2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.42■□□□□ 0.7
Trim8Q99PJ2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim8Q99PJ2 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trim8Q99PJ2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim8Q99PJ2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim8Q99PJ2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trim8Q99PJ2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim8Q99PJ2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim8Q99PJ2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim8Q99PJ2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.4■□□□□ 0.7
Trim8Q99PJ2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.4■□□□□ 0.7
Trim8Q99PJ2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim8Q99PJ2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim8Q99PJ2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Trim8Q99PJ2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim8Q99PJ2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.4■□□□□ 0.7
Trim8Q99PJ2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim8Q99PJ2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim8Q99PJ2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim8Q99PJ2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim8Q99PJ2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Trim8Q99PJ2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.39■□□□□ 0.69
Trim8Q99PJ2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim8Q99PJ2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.39■□□□□ 0.69
Trim8Q99PJ2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim8Q99PJ2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim8Q99PJ2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Trim8Q99PJ2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.39■□□□□ 0.69
Trim8Q99PJ2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trim8Q99PJ2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Trim8Q99PJ2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Trim8Q99PJ2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Trim8Q99PJ2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Trim8Q99PJ2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim8Q99PJ2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim8Q99PJ2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim8Q99PJ2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim8Q99PJ2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim8Q99PJ2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.38■□□□□ 0.69
Trim8Q99PJ2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Trim8Q99PJ2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim8Q99PJ2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.37■□□□□ 0.69
Trim8Q99PJ2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim8Q99PJ2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim8Q99PJ2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim8Q99PJ2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim8Q99PJ2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms