Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Chmp1b1Q99LU0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp1b1Q99LU0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp1b1Q99LU0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp1b1Q99LU0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Chmp1b1Q99LU0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp1b1Q99LU0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
Chmp1b1Q99LU0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp1b1Q99LU0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp1b1Q99LU0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Chmp1b1Q99LU0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.71■□□□□ 0.59
Chmp1b1Q99LU0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp1b1Q99LU0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp1b1Q99LU0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp1b1Q99LU0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp1b1Q99LU0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp1b1Q99LU0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp1b1Q99LU0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp1b1Q99LU0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.7■□□□□ 0.58
Chmp1b1Q99LU0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp1b1Q99LU0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp1b1Q99LU0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp1b1Q99LU0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp1b1Q99LU0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp1b1Q99LU0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp1b1Q99LU0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp1b1Q99LU0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp1b1Q99LU0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp1b1Q99LU0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp1b1Q99LU0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp1b1Q99LU0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp1b1Q99LU0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
Chmp1b1Q99LU0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp1b1Q99LU0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Chmp1b1Q99LU0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.68■□□□□ 0.58
Chmp1b1Q99LU0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp1b1Q99LU0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.68■□□□□ 0.58
Chmp1b1Q99LU0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp1b1Q99LU0 Gm9870-201ENSMUST00000063874 645 ntBASIC18.68■□□□□ 0.58
Chmp1b1Q99LU0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp1b1Q99LU0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Chmp1b1Q99LU0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Chmp1b1Q99LU0 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.68■□□□□ 0.58
Chmp1b1Q99LU0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp1b1Q99LU0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Chmp1b1Q99LU0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp1b1Q99LU0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp1b1Q99LU0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Chmp1b1Q99LU0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.67■□□□□ 0.58
Chmp1b1Q99LU0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.67■□□□□ 0.58
Chmp1b1Q99LU0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.67■□□□□ 0.58
Chmp1b1Q99LU0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp1b1Q99LU0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Chmp1b1Q99LU0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp1b1Q99LU0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp1b1Q99LU0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp1b1Q99LU0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp1b1Q99LU0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Chmp1b1Q99LU0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp1b1Q99LU0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp1b1Q99LU0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Chmp1b1Q99LU0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp1b1Q99LU0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Chmp1b1Q99LU0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.66■□□□□ 0.58
Chmp1b1Q99LU0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.66■□□□□ 0.58
Chmp1b1Q99LU0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp1b1Q99LU0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.66■□□□□ 0.58
Chmp1b1Q99LU0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Chmp1b1Q99LU0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.66■□□□□ 0.58
Chmp1b1Q99LU0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp1b1Q99LU0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp1b1Q99LU0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp1b1Q99LU0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp1b1Q99LU0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp1b1Q99LU0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.65■□□□□ 0.58
Chmp1b1Q99LU0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Chmp1b1Q99LU0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp1b1Q99LU0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp1b1Q99LU0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp1b1Q99LU0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Chmp1b1Q99LU0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp1b1Q99LU0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Chmp1b1Q99LU0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Chmp1b1Q99LU0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp1b1Q99LU0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp1b1Q99LU0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
Chmp1b1Q99LU0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp1b1Q99LU0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp1b1Q99LU0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp1b1Q99LU0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp1b1Q99LU0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp1b1Q99LU0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp1b1Q99LU0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp1b1Q99LU0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp1b1Q99LU0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Chmp1b1Q99LU0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp1b1Q99LU0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp1b1Q99LU0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp1b1Q99LU0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Chmp1b1Q99LU0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms