Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdk9Q99J95 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Cdk9Q99J95 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdk9Q99J95 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cdk9Q99J95 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Cdk9Q99J95 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Cdk9Q99J95 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdk9Q99J95 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdk9Q99J95 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdk9Q99J95 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdk9Q99J95 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdk9Q99J95 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdk9Q99J95 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdk9Q99J95 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.94■□□□□ 0.78
Cdk9Q99J95 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdk9Q99J95 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cdk9Q99J95 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cdk9Q99J95 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.94■□□□□ 0.78
Cdk9Q99J95 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.94■□□□□ 0.78
Cdk9Q99J95 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cdk9Q99J95 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdk9Q99J95 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdk9Q99J95 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cdk9Q99J95 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdk9Q99J95 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdk9Q99J95 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdk9Q99J95 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cdk9Q99J95 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Cdk9Q99J95 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdk9Q99J95 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdk9Q99J95 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Cdk9Q99J95 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Cdk9Q99J95 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.92■□□□□ 0.78
Cdk9Q99J95 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdk9Q99J95 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.92■□□□□ 0.78
Cdk9Q99J95 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdk9Q99J95 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.92■□□□□ 0.78
Cdk9Q99J95 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdk9Q99J95 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.92■□□□□ 0.78
Cdk9Q99J95 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdk9Q99J95 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdk9Q99J95 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdk9Q99J95 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cdk9Q99J95 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Cdk9Q99J95 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdk9Q99J95 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdk9Q99J95 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.91■□□□□ 0.78
Cdk9Q99J95 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Cdk9Q99J95 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdk9Q99J95 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdk9Q99J95 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.91■□□□□ 0.78
Cdk9Q99J95 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdk9Q99J95 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdk9Q99J95 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdk9Q99J95 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdk9Q99J95 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdk9Q99J95 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdk9Q99J95 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cdk9Q99J95 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdk9Q99J95 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdk9Q99J95 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdk9Q99J95 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Cdk9Q99J95 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cdk9Q99J95 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdk9Q99J95 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cdk9Q99J95 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdk9Q99J95 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdk9Q99J95 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdk9Q99J95 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Cdk9Q99J95 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Cdk9Q99J95 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Cdk9Q99J95 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.78
Cdk9Q99J95 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdk9Q99J95 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdk9Q99J95 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.89■□□□□ 0.77
Cdk9Q99J95 Gm5921-201ENSMUST00000075898 882 ntBASIC19.89■□□□□ 0.77
Cdk9Q99J95 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdk9Q99J95 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdk9Q99J95 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdk9Q99J95 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdk9Q99J95 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdk9Q99J95 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.88■□□□□ 0.77
Cdk9Q99J95 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdk9Q99J95 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdk9Q99J95 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Cdk9Q99J95 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.88■□□□□ 0.77
Cdk9Q99J95 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.88■□□□□ 0.77
Cdk9Q99J95 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdk9Q99J95 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdk9Q99J95 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdk9Q99J95 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Cdk9Q99J95 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdk9Q99J95 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdk9Q99J95 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Cdk9Q99J95 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Cdk9Q99J95 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdk9Q99J95 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Cdk9Q99J95 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cdk9Q99J95 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdk9Q99J95 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms