Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.12■□□□□ 0.65
Pcdhb20Q91XZ9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Pcdhb20Q91XZ9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb20Q91XZ9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb20Q91XZ9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb20Q91XZ9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb20Q91XZ9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.11■□□□□ 0.65
Pcdhb20Q91XZ9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Pcdhb20Q91XZ9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Pcdhb20Q91XZ9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.1■□□□□ 0.65
Pcdhb20Q91XZ9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb20Q91XZ9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb20Q91XZ9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb20Q91XZ9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.1■□□□□ 0.65
Pcdhb20Q91XZ9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.1■□□□□ 0.65
Pcdhb20Q91XZ9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb20Q91XZ9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.1■□□□□ 0.65
Pcdhb20Q91XZ9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Pcdhb20Q91XZ9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Pcdhb20Q91XZ9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.1■□□□□ 0.65
Pcdhb20Q91XZ9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Pcdhb20Q91XZ9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Pcdhb20Q91XZ9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb20Q91XZ9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb20Q91XZ9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb20Q91XZ9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.09■□□□□ 0.65
Pcdhb20Q91XZ9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb20Q91XZ9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb20Q91XZ9 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb20Q91XZ9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.09■□□□□ 0.65
Pcdhb20Q91XZ9 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.09■□□□□ 0.65
Pcdhb20Q91XZ9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb20Q91XZ9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb20Q91XZ9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb20Q91XZ9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb20Q91XZ9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb20Q91XZ9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb20Q91XZ9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb20Q91XZ9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Pcdhb20Q91XZ9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb20Q91XZ9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb20Q91XZ9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb20Q91XZ9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb20Q91XZ9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb20Q91XZ9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb20Q91XZ9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
Pcdhb20Q91XZ9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb20Q91XZ9 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Pcdhb20Q91XZ9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb20Q91XZ9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb20Q91XZ9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
Pcdhb20Q91XZ9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb20Q91XZ9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb20Q91XZ9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb20Q91XZ9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Pcdhb20Q91XZ9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb20Q91XZ9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.07■□□□□ 0.64
Pcdhb20Q91XZ9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb20Q91XZ9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb20Q91XZ9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb20Q91XZ9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb20Q91XZ9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb20Q91XZ9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb20Q91XZ9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb20Q91XZ9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.06■□□□□ 0.64
Pcdhb20Q91XZ9 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.06■□□□□ 0.64
Pcdhb20Q91XZ9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb20Q91XZ9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb20Q91XZ9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.06■□□□□ 0.64
Pcdhb20Q91XZ9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb20Q91XZ9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Pcdhb20Q91XZ9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb20Q91XZ9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb20Q91XZ9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb20Q91XZ9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb20Q91XZ9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb20Q91XZ9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb20Q91XZ9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
Pcdhb20Q91XZ9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
Pcdhb20Q91XZ9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.05■□□□□ 0.64
Pcdhb20Q91XZ9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Pcdhb20Q91XZ9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb20Q91XZ9 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb20Q91XZ9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb20Q91XZ9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb20Q91XZ9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb20Q91XZ9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb20Q91XZ9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Pcdhb20Q91XZ9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb20Q91XZ9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb20Q91XZ9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Pcdhb20Q91XZ9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb20Q91XZ9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb20Q91XZ9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb20Q91XZ9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Pcdhb20Q91XZ9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb20Q91XZ9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.04■□□□□ 0.64
Pcdhb20Q91XZ9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Pcdhb20Q91XZ9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb20Q91XZ9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms