Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb5Q91XZ5 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhb5Q91XZ5 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhb5Q91XZ5 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Pcdhb5Q91XZ5 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhb5Q91XZ5 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb5Q91XZ5 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb5Q91XZ5 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb5Q91XZ5 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb5Q91XZ5 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb5Q91XZ5 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb5Q91XZ5 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhb5Q91XZ5 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhb5Q91XZ5 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhb5Q91XZ5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhb5Q91XZ5 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhb5Q91XZ5 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhb5Q91XZ5 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhb5Q91XZ5 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC23.58■■□□□ 1.37
Pcdhb5Q91XZ5 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhb5Q91XZ5 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhb5Q91XZ5 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Pcdhb5Q91XZ5 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhb5Q91XZ5 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhb5Q91XZ5 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Pcdhb5Q91XZ5 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Pcdhb5Q91XZ5 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.36
Pcdhb5Q91XZ5 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb5Q91XZ5 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb5Q91XZ5 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb5Q91XZ5 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb5Q91XZ5 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC23.57■■□□□ 1.36
Pcdhb5Q91XZ5 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb5Q91XZ5 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Pcdhb5Q91XZ5 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb5Q91XZ5 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb5Q91XZ5 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb5Q91XZ5 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb5Q91XZ5 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb5Q91XZ5 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb5Q91XZ5 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb5Q91XZ5 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC23.57■■□□□ 1.36
Pcdhb5Q91XZ5 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb5Q91XZ5 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC23.56■■□□□ 1.36
Pcdhb5Q91XZ5 Spcs1-207ENSMUST00000228767 1008 ntBASIC23.56■■□□□ 1.36
Pcdhb5Q91XZ5 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb5Q91XZ5 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb5Q91XZ5 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Pcdhb5Q91XZ5 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC23.56■■□□□ 1.36
Pcdhb5Q91XZ5 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb5Q91XZ5 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC23.55■■□□□ 1.36
Pcdhb5Q91XZ5 Gm32051-202ENSMUST00000197905 2385 ntBASIC23.55■■□□□ 1.36
Pcdhb5Q91XZ5 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb5Q91XZ5 Gm14281-201ENSMUST00000121700 1294 ntBASIC23.55■■□□□ 1.36
Pcdhb5Q91XZ5 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC23.55■■□□□ 1.36
Pcdhb5Q91XZ5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb5Q91XZ5 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb5Q91XZ5 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Pcdhb5Q91XZ5 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Pcdhb5Q91XZ5 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb5Q91XZ5 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb5Q91XZ5 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb5Q91XZ5 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC23.54■■□□□ 1.36
Pcdhb5Q91XZ5 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC23.54■■□□□ 1.36
Pcdhb5Q91XZ5 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC23.54■■□□□ 1.36
Pcdhb5Q91XZ5 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb5Q91XZ5 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb5Q91XZ5 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb5Q91XZ5 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb5Q91XZ5 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Pcdhb5Q91XZ5 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC23.53■■□□□ 1.36
Pcdhb5Q91XZ5 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb5Q91XZ5 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb5Q91XZ5 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC23.53■■□□□ 1.36
Pcdhb5Q91XZ5 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb5Q91XZ5 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb5Q91XZ5 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb5Q91XZ5 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb5Q91XZ5 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb5Q91XZ5 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC23.52■■□□□ 1.36
Pcdhb5Q91XZ5 Gm27801-201ENSMUST00000184174 223 ntBASIC23.52■■□□□ 1.36
Pcdhb5Q91XZ5 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC23.52■■□□□ 1.36
Pcdhb5Q91XZ5 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb5Q91XZ5 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb5Q91XZ5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb5Q91XZ5 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb5Q91XZ5 Gm10571-201ENSMUST00000097869 1638 ntBASIC23.51■■□□□ 1.35
Pcdhb5Q91XZ5 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhb5Q91XZ5 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC23.51■■□□□ 1.35
Pcdhb5Q91XZ5 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhb5Q91XZ5 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC23.51■■□□□ 1.35
Pcdhb5Q91XZ5 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhb5Q91XZ5 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
Pcdhb5Q91XZ5 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhb5Q91XZ5 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC23.5■■□□□ 1.35
Pcdhb5Q91XZ5 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhb5Q91XZ5 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
Pcdhb5Q91XZ5 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhb5Q91XZ5 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhb5Q91XZ5 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms