Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
Pcdhb8Q91XZ2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb8Q91XZ2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb8Q91XZ2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb8Q91XZ2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb8Q91XZ2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcdhb8Q91XZ2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb8Q91XZ2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb8Q91XZ2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcdhb8Q91XZ2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
Pcdhb8Q91XZ2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Pcdhb8Q91XZ2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Pcdhb8Q91XZ2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb8Q91XZ2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb8Q91XZ2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb8Q91XZ2 Golph3-202ENSMUST00000226517 2359 ntBASIC19.43■□□□□ 0.7
Pcdhb8Q91XZ2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb8Q91XZ2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Pcdhb8Q91XZ2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Pcdhb8Q91XZ2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb8Q91XZ2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb8Q91XZ2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Pcdhb8Q91XZ2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Pcdhb8Q91XZ2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Pcdhb8Q91XZ2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb8Q91XZ2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb8Q91XZ2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb8Q91XZ2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb8Q91XZ2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Pcdhb8Q91XZ2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb8Q91XZ2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Pcdhb8Q91XZ2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb8Q91XZ2 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb8Q91XZ2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb8Q91XZ2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb8Q91XZ2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Pcdhb8Q91XZ2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Pcdhb8Q91XZ2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb8Q91XZ2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb8Q91XZ2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.41■□□□□ 0.7
Pcdhb8Q91XZ2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb8Q91XZ2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb8Q91XZ2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb8Q91XZ2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb8Q91XZ2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb8Q91XZ2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb8Q91XZ2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb8Q91XZ2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb8Q91XZ2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb8Q91XZ2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb8Q91XZ2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb8Q91XZ2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhb8Q91XZ2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb8Q91XZ2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb8Q91XZ2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhb8Q91XZ2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb8Q91XZ2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb8Q91XZ2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhb8Q91XZ2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhb8Q91XZ2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Pcdhb8Q91XZ2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhb8Q91XZ2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhb8Q91XZ2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhb8Q91XZ2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Pcdhb8Q91XZ2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.39■□□□□ 0.69
Pcdhb8Q91XZ2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb8Q91XZ2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb8Q91XZ2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb8Q91XZ2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb8Q91XZ2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Pcdhb8Q91XZ2 Mir6236-201ENSMUST00000184437 123 ntBASIC19.38■□□□□ 0.69
Pcdhb8Q91XZ2 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Pcdhb8Q91XZ2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.38■□□□□ 0.69
Pcdhb8Q91XZ2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.38■□□□□ 0.69
Pcdhb8Q91XZ2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb8Q91XZ2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.38■□□□□ 0.69
Pcdhb8Q91XZ2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb8Q91XZ2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb8Q91XZ2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb8Q91XZ2 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb8Q91XZ2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb8Q91XZ2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb8Q91XZ2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Pcdhb8Q91XZ2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb8Q91XZ2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Pcdhb8Q91XZ2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.37■□□□□ 0.69
Pcdhb8Q91XZ2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb8Q91XZ2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb8Q91XZ2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb8Q91XZ2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb8Q91XZ2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb8Q91XZ2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb8Q91XZ2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.36■□□□□ 0.69
Pcdhb8Q91XZ2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb8Q91XZ2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Pcdhb8Q91XZ2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.36■□□□□ 0.69
Pcdhb8Q91XZ2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb8Q91XZ2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb8Q91XZ2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb8Q91XZ2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms