Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.64■□□□□ 0.41
Pcdhga3Q91XY5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhga3Q91XY5 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga3Q91XY5 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga3Q91XY5 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdhga3Q91XY5 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga3Q91XY5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga3Q91XY5 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga3Q91XY5 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga3Q91XY5 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.63■□□□□ 0.41
Pcdhga3Q91XY5 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga3Q91XY5 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga3Q91XY5 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdhga3Q91XY5 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
Pcdhga3Q91XY5 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Pcdhga3Q91XY5 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga3Q91XY5 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pcdhga3Q91XY5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga3Q91XY5 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga3Q91XY5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga3Q91XY5 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga3Q91XY5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga3Q91XY5 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Pcdhga3Q91XY5 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga3Q91XY5 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhga3Q91XY5 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga3Q91XY5 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga3Q91XY5 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga3Q91XY5 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga3Q91XY5 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga3Q91XY5 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga3Q91XY5 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga3Q91XY5 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga3Q91XY5 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga3Q91XY5 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdhga3Q91XY5 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga3Q91XY5 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga3Q91XY5 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.61■□□□□ 0.41
Pcdhga3Q91XY5 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga3Q91XY5 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.6■□□□□ 0.41
Pcdhga3Q91XY5 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.6■□□□□ 0.41
Pcdhga3Q91XY5 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Pcdhga3Q91XY5 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga3Q91XY5 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
Pcdhga3Q91XY5 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga3Q91XY5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga3Q91XY5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga3Q91XY5 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga3Q91XY5 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga3Q91XY5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga3Q91XY5 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga3Q91XY5 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga3Q91XY5 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga3Q91XY5 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga3Q91XY5 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga3Q91XY5 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Pcdhga3Q91XY5 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.59■□□□□ 0.41
Pcdhga3Q91XY5 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga3Q91XY5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Pcdhga3Q91XY5 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Pcdhga3Q91XY5 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Pcdhga3Q91XY5 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga3Q91XY5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Pcdhga3Q91XY5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga3Q91XY5 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga3Q91XY5 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Pcdhga3Q91XY5 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga3Q91XY5 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga3Q91XY5 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga3Q91XY5 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhga3Q91XY5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhga3Q91XY5 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.58■□□□□ 0.41
Pcdhga3Q91XY5 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhga3Q91XY5 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdhga3Q91XY5 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhga3Q91XY5 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhga3Q91XY5 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhga3Q91XY5 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhga3Q91XY5 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga3Q91XY5 Golph3-202ENSMUST00000226517 2359 ntBASIC17.57■□□□□ 0.4
Pcdhga3Q91XY5 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga3Q91XY5 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga3Q91XY5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga3Q91XY5 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga3Q91XY5 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdhga3Q91XY5 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdhga3Q91XY5 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.57■□□□□ 0.4
Pcdhga3Q91XY5 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga3Q91XY5 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Pcdhga3Q91XY5 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga3Q91XY5 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga3Q91XY5 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga3Q91XY5 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga3Q91XY5 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga3Q91XY5 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga3Q91XY5 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga3Q91XY5 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga3Q91XY5 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga3Q91XY5 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga3Q91XY5 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms