Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhga9Q91XX9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhga9Q91XX9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.7■□□□□ 0.74
Pcdhga9Q91XX9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhga9Q91XX9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.7■□□□□ 0.74
Pcdhga9Q91XX9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhga9Q91XX9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhga9Q91XX9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhga9Q91XX9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhga9Q91XX9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhga9Q91XX9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhga9Q91XX9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhga9Q91XX9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Pcdhga9Q91XX9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Pcdhga9Q91XX9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhga9Q91XX9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Pcdhga9Q91XX9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhga9Q91XX9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhga9Q91XX9 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.69■□□□□ 0.74
Pcdhga9Q91XX9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhga9Q91XX9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhga9Q91XX9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhga9Q91XX9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhga9Q91XX9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcdhga9Q91XX9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.68■□□□□ 0.74
Pcdhga9Q91XX9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhga9Q91XX9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhga9Q91XX9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhga9Q91XX9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhga9Q91XX9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Pcdhga9Q91XX9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhga9Q91XX9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhga9Q91XX9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.67■□□□□ 0.74
Pcdhga9Q91XX9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.67■□□□□ 0.74
Pcdhga9Q91XX9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhga9Q91XX9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhga9Q91XX9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Pcdhga9Q91XX9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Pcdhga9Q91XX9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhga9Q91XX9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Pcdhga9Q91XX9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhga9Q91XX9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhga9Q91XX9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhga9Q91XX9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhga9Q91XX9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhga9Q91XX9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhga9Q91XX9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhga9Q91XX9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhga9Q91XX9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhga9Q91XX9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhga9Q91XX9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhga9Q91XX9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhga9Q91XX9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhga9Q91XX9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhga9Q91XX9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Pcdhga9Q91XX9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhga9Q91XX9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.64■□□□□ 0.74
Pcdhga9Q91XX9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhga9Q91XX9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.64■□□□□ 0.73
Pcdhga9Q91XX9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.64■□□□□ 0.73
Pcdhga9Q91XX9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhga9Q91XX9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhga9Q91XX9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhga9Q91XX9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhga9Q91XX9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.64■□□□□ 0.73
Pcdhga9Q91XX9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Pcdhga9Q91XX9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhga9Q91XX9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhga9Q91XX9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhga9Q91XX9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhga9Q91XX9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
Pcdhga9Q91XX9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Pcdhga9Q91XX9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhga9Q91XX9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.63■□□□□ 0.73
Pcdhga9Q91XX9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.63■□□□□ 0.73
Pcdhga9Q91XX9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.63■□□□□ 0.73
Pcdhga9Q91XX9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhga9Q91XX9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhga9Q91XX9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhga9Q91XX9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhga9Q91XX9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.62■□□□□ 0.73
Pcdhga9Q91XX9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhga9Q91XX9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhga9Q91XX9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhga9Q91XX9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Pcdhga9Q91XX9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhga9Q91XX9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhga9Q91XX9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhga9Q91XX9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhga9Q91XX9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhga9Q91XX9 Gm43137-201ENSMUST00000198052 594 ntBASIC19.61■□□□□ 0.73
Pcdhga9Q91XX9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhga9Q91XX9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.6■□□□□ 0.73
Pcdhga9Q91XX9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Pcdhga9Q91XX9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhga9Q91XX9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Pcdhga9Q91XX9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhga9Q91XX9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.6■□□□□ 0.73
Pcdhga9Q91XX9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhga9Q91XX9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms