Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhgb1Q91XX8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhgb1Q91XX8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
Pcdhgb1Q91XX8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhgb1Q91XX8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Pcdhgb1Q91XX8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhgb1Q91XX8 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhgb1Q91XX8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhgb1Q91XX8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhgb1Q91XX8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhgb1Q91XX8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.69■□□□□ 0.9
Pcdhgb1Q91XX8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhgb1Q91XX8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.69■□□□□ 0.9
Pcdhgb1Q91XX8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhgb1Q91XX8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhgb1Q91XX8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhgb1Q91XX8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.69■□□□□ 0.9
Pcdhgb1Q91XX8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhgb1Q91XX8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhgb1Q91XX8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhgb1Q91XX8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhgb1Q91XX8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Pcdhgb1Q91XX8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhgb1Q91XX8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhgb1Q91XX8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhgb1Q91XX8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.68■□□□□ 0.9
Pcdhgb1Q91XX8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.68■□□□□ 0.9
Pcdhgb1Q91XX8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhgb1Q91XX8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhgb1Q91XX8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgb1Q91XX8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgb1Q91XX8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgb1Q91XX8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgb1Q91XX8 Gm18284-201ENSMUST00000172604 624 ntBASIC20.67■□□□□ 0.9
Pcdhgb1Q91XX8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgb1Q91XX8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgb1Q91XX8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgb1Q91XX8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Pcdhgb1Q91XX8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Pcdhgb1Q91XX8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgb1Q91XX8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.66■□□□□ 0.9
Pcdhgb1Q91XX8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Pcdhgb1Q91XX8 Gm26833-201ENSMUST00000180899 440 ntBASIC20.66■□□□□ 0.9
Pcdhgb1Q91XX8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhgb1Q91XX8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhgb1Q91XX8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Pcdhgb1Q91XX8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Pcdhgb1Q91XX8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhgb1Q91XX8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhgb1Q91XX8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhgb1Q91XX8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhgb1Q91XX8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhgb1Q91XX8 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.65■□□□□ 0.9
Pcdhgb1Q91XX8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhgb1Q91XX8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhgb1Q91XX8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Pcdhgb1Q91XX8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhgb1Q91XX8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.65■□□□□ 0.9
Pcdhgb1Q91XX8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.65■□□□□ 0.9
Pcdhgb1Q91XX8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhgb1Q91XX8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Pcdhgb1Q91XX8 Gm40848-201ENSMUST00000221998 324 ntBASIC20.65■□□□□ 0.9
Pcdhgb1Q91XX8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhgb1Q91XX8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhgb1Q91XX8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhgb1Q91XX8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhgb1Q91XX8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhgb1Q91XX8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhgb1Q91XX8 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhgb1Q91XX8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhgb1Q91XX8 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhgb1Q91XX8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhgb1Q91XX8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhgb1Q91XX8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhgb1Q91XX8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhgb1Q91XX8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhgb1Q91XX8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhgb1Q91XX8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.64■□□□□ 0.89
Pcdhgb1Q91XX8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhgb1Q91XX8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgb1Q91XX8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgb1Q91XX8 Gm8495-201ENSMUST00000188740 694 ntBASIC20.63■□□□□ 0.89
Pcdhgb1Q91XX8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgb1Q91XX8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgb1Q91XX8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhgb1Q91XX8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhgb1Q91XX8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhgb1Q91XX8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhgb1Q91XX8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhgb1Q91XX8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Pcdhgb1Q91XX8 Mir6236-201ENSMUST00000184437 123 ntBASIC20.62■□□□□ 0.89
Pcdhgb1Q91XX8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhgb1Q91XX8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgb1Q91XX8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.61■□□□□ 0.89
Pcdhgb1Q91XX8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgb1Q91XX8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgb1Q91XX8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgb1Q91XX8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.61■□□□□ 0.89
Pcdhgb1Q91XX8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgb1Q91XX8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms