Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhgb5Q91XX5 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhgb5Q91XX5 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhgb5Q91XX5 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.82■□□□□ 0.76
Pcdhgb5Q91XX5 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhgb5Q91XX5 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhgb5Q91XX5 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhgb5Q91XX5 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhgb5Q91XX5 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhgb5Q91XX5 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhgb5Q91XX5 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhgb5Q91XX5 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhgb5Q91XX5 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhgb5Q91XX5 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhgb5Q91XX5 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhgb5Q91XX5 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhgb5Q91XX5 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhgb5Q91XX5 Gm26571-201ENSMUST00000181399 666 ntBASIC19.8■□□□□ 0.76
Pcdhgb5Q91XX5 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.8■□□□□ 0.76
Pcdhgb5Q91XX5 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.8■□□□□ 0.76
Pcdhgb5Q91XX5 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.8■□□□□ 0.76
Pcdhgb5Q91XX5 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhgb5Q91XX5 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhgb5Q91XX5 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhgb5Q91XX5 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhgb5Q91XX5 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhgb5Q91XX5 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhgb5Q91XX5 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgb5Q91XX5 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Pcdhgb5Q91XX5 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgb5Q91XX5 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgb5Q91XX5 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.79■□□□□ 0.76
Pcdhgb5Q91XX5 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgb5Q91XX5 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgb5Q91XX5 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgb5Q91XX5 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgb5Q91XX5 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhgb5Q91XX5 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhgb5Q91XX5 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Pcdhgb5Q91XX5 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Pcdhgb5Q91XX5 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhgb5Q91XX5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Pcdhgb5Q91XX5 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgb5Q91XX5 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgb5Q91XX5 Gm10849-201ENSMUST00000100397 618 ntBASIC19.77■□□□□ 0.76
Pcdhgb5Q91XX5 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.77■□□□□ 0.76
Pcdhgb5Q91XX5 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.77■□□□□ 0.76
Pcdhgb5Q91XX5 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgb5Q91XX5 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcdhgb5Q91XX5 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.76■□□□□ 0.75
Pcdhgb5Q91XX5 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb5Q91XX5 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb5Q91XX5 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb5Q91XX5 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb5Q91XX5 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Pcdhgb5Q91XX5 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Pcdhgb5Q91XX5 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Pcdhgb5Q91XX5 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgb5Q91XX5 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgb5Q91XX5 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgb5Q91XX5 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.74■□□□□ 0.75
Pcdhgb5Q91XX5 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgb5Q91XX5 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Pcdhgb5Q91XX5 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.74■□□□□ 0.75
Pcdhgb5Q91XX5 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgb5Q91XX5 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgb5Q91XX5 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgb5Q91XX5 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgb5Q91XX5 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgb5Q91XX5 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgb5Q91XX5 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Pcdhgb5Q91XX5 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgb5Q91XX5 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb5Q91XX5 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.73■□□□□ 0.75
Pcdhgb5Q91XX5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb5Q91XX5 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb5Q91XX5 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb5Q91XX5 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Pcdhgb5Q91XX5 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb5Q91XX5 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.73■□□□□ 0.75
Pcdhgb5Q91XX5 AV356131-201ENSMUST00000206201 750 ntBASIC19.73■□□□□ 0.75
Pcdhgb5Q91XX5 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb5Q91XX5 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb5Q91XX5 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.73■□□□□ 0.75
Pcdhgb5Q91XX5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb5Q91XX5 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb5Q91XX5 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb5Q91XX5 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb5Q91XX5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb5Q91XX5 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb5Q91XX5 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.72■□□□□ 0.75
Pcdhgb5Q91XX5 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb5Q91XX5 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb5Q91XX5 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcdhgb5Q91XX5 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb5Q91XX5 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhgb5Q91XX5 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhgb5Q91XX5 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhgb5Q91XX5 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhgb5Q91XX5 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms