Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trex1Q91XB0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC23■■□□□ 1.27
Trex1Q91XB0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trex1Q91XB0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC23■■□□□ 1.27
Trex1Q91XB0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trex1Q91XB0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Trex1Q91XB0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trex1Q91XB0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trex1Q91XB0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Trex1Q91XB0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trex1Q91XB0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trex1Q91XB0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Trex1Q91XB0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC22.99■■□□□ 1.27
Trex1Q91XB0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC22.99■■□□□ 1.27
Trex1Q91XB0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC22.99■■□□□ 1.27
Trex1Q91XB0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Trex1Q91XB0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trex1Q91XB0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trex1Q91XB0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trex1Q91XB0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trex1Q91XB0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trex1Q91XB0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trex1Q91XB0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Trex1Q91XB0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trex1Q91XB0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC22.98■■□□□ 1.27
Trex1Q91XB0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
Trex1Q91XB0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trex1Q91XB0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trex1Q91XB0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Trex1Q91XB0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trex1Q91XB0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trex1Q91XB0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trex1Q91XB0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC22.97■■□□□ 1.27
Trex1Q91XB0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Trex1Q91XB0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC22.96■■□□□ 1.27
Trex1Q91XB0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC22.96■■□□□ 1.27
Trex1Q91XB0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trex1Q91XB0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC22.96■■□□□ 1.27
Trex1Q91XB0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trex1Q91XB0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trex1Q91XB0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Trex1Q91XB0 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.96■■□□□ 1.27
Trex1Q91XB0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trex1Q91XB0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Trex1Q91XB0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Trex1Q91XB0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trex1Q91XB0 Gm9988-201ENSMUST00000069786 435 ntBASIC22.95■■□□□ 1.26
Trex1Q91XB0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Trex1Q91XB0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trex1Q91XB0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC22.94■■□□□ 1.26
Trex1Q91XB0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC22.94■■□□□ 1.26
Trex1Q91XB0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trex1Q91XB0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC22.94■■□□□ 1.26
Trex1Q91XB0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Trex1Q91XB0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC22.94■■□□□ 1.26
Trex1Q91XB0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trex1Q91XB0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trex1Q91XB0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Trex1Q91XB0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Trex1Q91XB0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trex1Q91XB0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trex1Q91XB0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.93■■□□□ 1.26
Trex1Q91XB0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trex1Q91XB0 Gm14281-201ENSMUST00000121700 1294 ntBASIC22.93■■□□□ 1.26
Trex1Q91XB0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Trex1Q91XB0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC22.93■■□□□ 1.26
Trex1Q91XB0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Trex1Q91XB0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trex1Q91XB0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trex1Q91XB0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Trex1Q91XB0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trex1Q91XB0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Trex1Q91XB0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trex1Q91XB0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
Trex1Q91XB0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Trex1Q91XB0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Trex1Q91XB0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.92■■□□□ 1.26
Trex1Q91XB0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Trex1Q91XB0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Trex1Q91XB0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC22.92■■□□□ 1.26
Trex1Q91XB0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Trex1Q91XB0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Trex1Q91XB0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC22.92■■□□□ 1.26
Trex1Q91XB0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC22.92■■□□□ 1.26
Trex1Q91XB0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Trex1Q91XB0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Trex1Q91XB0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trex1Q91XB0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC22.91■■□□□ 1.26
Trex1Q91XB0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC22.91■■□□□ 1.26
Trex1Q91XB0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trex1Q91XB0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trex1Q91XB0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Trex1Q91XB0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC22.91■■□□□ 1.26
Trex1Q91XB0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trex1Q91XB0 Gm12504-201ENSMUST00000120860 2231 ntBASIC22.91■■□□□ 1.26
Trex1Q91XB0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.91■■□□□ 1.26
Trex1Q91XB0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
Trex1Q91XB0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Trex1Q91XB0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Trex1Q91XB0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms