Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb11Q91UZ8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb11Q91UZ8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb11Q91UZ8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb11Q91UZ8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb11Q91UZ8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb11Q91UZ8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Pcdhb11Q91UZ8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb11Q91UZ8 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.41■□□□□ 0.86
Pcdhb11Q91UZ8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Pcdhb11Q91UZ8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb11Q91UZ8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Pcdhb11Q91UZ8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Pcdhb11Q91UZ8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb11Q91UZ8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb11Q91UZ8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb11Q91UZ8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.4■□□□□ 0.86
Pcdhb11Q91UZ8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
Pcdhb11Q91UZ8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.4■□□□□ 0.86
Pcdhb11Q91UZ8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb11Q91UZ8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.4■□□□□ 0.86
Pcdhb11Q91UZ8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.39■□□□□ 0.86
Pcdhb11Q91UZ8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Pcdhb11Q91UZ8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb11Q91UZ8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb11Q91UZ8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.39■□□□□ 0.85
Pcdhb11Q91UZ8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Pcdhb11Q91UZ8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb11Q91UZ8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb11Q91UZ8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb11Q91UZ8 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb11Q91UZ8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb11Q91UZ8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Pcdhb11Q91UZ8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb11Q91UZ8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.38■□□□□ 0.85
Pcdhb11Q91UZ8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.38■□□□□ 0.85
Pcdhb11Q91UZ8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.38■□□□□ 0.85
Pcdhb11Q91UZ8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb11Q91UZ8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
Pcdhb11Q91UZ8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb11Q91UZ8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb11Q91UZ8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.38■□□□□ 0.85
Pcdhb11Q91UZ8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb11Q91UZ8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb11Q91UZ8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb11Q91UZ8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb11Q91UZ8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb11Q91UZ8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb11Q91UZ8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Pcdhb11Q91UZ8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb11Q91UZ8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Pcdhb11Q91UZ8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb11Q91UZ8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb11Q91UZ8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb11Q91UZ8 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb11Q91UZ8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb11Q91UZ8 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Pcdhb11Q91UZ8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.36■□□□□ 0.85
Pcdhb11Q91UZ8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb11Q91UZ8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb11Q91UZ8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb11Q91UZ8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Pcdhb11Q91UZ8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb11Q91UZ8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb11Q91UZ8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Pcdhb11Q91UZ8 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb11Q91UZ8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb11Q91UZ8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.35■□□□□ 0.85
Pcdhb11Q91UZ8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb11Q91UZ8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb11Q91UZ8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
Pcdhb11Q91UZ8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb11Q91UZ8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb11Q91UZ8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.34■□□□□ 0.85
Pcdhb11Q91UZ8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb11Q91UZ8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb11Q91UZ8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb11Q91UZ8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb11Q91UZ8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.34■□□□□ 0.85
Pcdhb11Q91UZ8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Pcdhb11Q91UZ8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb11Q91UZ8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb11Q91UZ8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb11Q91UZ8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb11Q91UZ8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Pcdhb11Q91UZ8 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.33■□□□□ 0.85
Pcdhb11Q91UZ8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Pcdhb11Q91UZ8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb11Q91UZ8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Pcdhb11Q91UZ8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Pcdhb11Q91UZ8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Pcdhb11Q91UZ8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb11Q91UZ8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb11Q91UZ8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb11Q91UZ8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb11Q91UZ8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Pcdhb11Q91UZ8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.32■□□□□ 0.84
Pcdhb11Q91UZ8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb11Q91UZ8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb11Q91UZ8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms