Protein–RNA interactions for Protein: Q8VEG0

Ccdc71, Coiled-coil domain-containing protein 71, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71Q8VEG0 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.83■□□□□ 0.93
Ccdc71Q8VEG0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc71Q8VEG0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc71Q8VEG0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc71Q8VEG0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc71Q8VEG0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc71Q8VEG0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc71Q8VEG0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc71Q8VEG0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc71Q8VEG0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc71Q8VEG0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc71Q8VEG0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc71Q8VEG0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc71Q8VEG0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc71Q8VEG0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc71Q8VEG0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc71Q8VEG0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc71Q8VEG0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc71Q8VEG0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc71Q8VEG0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc71Q8VEG0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc71Q8VEG0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.8■□□□□ 0.92
Ccdc71Q8VEG0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc71Q8VEG0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc71Q8VEG0 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.8■□□□□ 0.92
Ccdc71Q8VEG0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Ccdc71Q8VEG0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc71Q8VEG0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Ccdc71Q8VEG0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc71Q8VEG0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.8■□□□□ 0.92
Ccdc71Q8VEG0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc71Q8VEG0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc71Q8VEG0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc71Q8VEG0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc71Q8VEG0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc71Q8VEG0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc71Q8VEG0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc71Q8VEG0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc71Q8VEG0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.79■□□□□ 0.92
Ccdc71Q8VEG0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc71Q8VEG0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc71Q8VEG0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc71Q8VEG0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc71Q8VEG0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc71Q8VEG0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.78■□□□□ 0.92
Ccdc71Q8VEG0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc71Q8VEG0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc71Q8VEG0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc71Q8VEG0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc71Q8VEG0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc71Q8VEG0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.77■□□□□ 0.92
Ccdc71Q8VEG0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ccdc71Q8VEG0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ccdc71Q8VEG0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ccdc71Q8VEG0 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Ccdc71Q8VEG0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc71Q8VEG0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc71Q8VEG0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc71Q8VEG0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc71Q8VEG0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc71Q8VEG0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc71Q8VEG0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc71Q8VEG0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Ccdc71Q8VEG0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc71Q8VEG0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc71Q8VEG0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Ccdc71Q8VEG0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Ccdc71Q8VEG0 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.75■□□□□ 0.91
Ccdc71Q8VEG0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc71Q8VEG0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc71Q8VEG0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc71Q8VEG0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc71Q8VEG0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc71Q8VEG0 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.74■□□□□ 0.91
Ccdc71Q8VEG0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.74■□□□□ 0.91
Ccdc71Q8VEG0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.74■□□□□ 0.91
Ccdc71Q8VEG0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Ccdc71Q8VEG0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
Ccdc71Q8VEG0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.73■□□□□ 0.91
Ccdc71Q8VEG0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc71Q8VEG0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.73■□□□□ 0.91
Ccdc71Q8VEG0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc71Q8VEG0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc71Q8VEG0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.73■□□□□ 0.91
Ccdc71Q8VEG0 Gm7514-201ENSMUST00000209475 934 ntBASIC20.73■□□□□ 0.91
Ccdc71Q8VEG0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc71Q8VEG0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc71Q8VEG0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc71Q8VEG0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc71Q8VEG0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc71Q8VEG0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc71Q8VEG0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc71Q8VEG0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.72■□□□□ 0.91
Ccdc71Q8VEG0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc71Q8VEG0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Ccdc71Q8VEG0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc71Q8VEG0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Ccdc71Q8VEG0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ccdc71Q8VEG0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc71Q8VEG0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 235.9 ms