Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx39aQ8VDW0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
Ddx39aQ8VDW0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx39aQ8VDW0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx39aQ8VDW0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Ddx39aQ8VDW0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx39aQ8VDW0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx39aQ8VDW0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC22.17■■□□□ 1.14
Ddx39aQ8VDW0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx39aQ8VDW0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC22.17■■□□□ 1.14
Ddx39aQ8VDW0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC22.17■■□□□ 1.14
Ddx39aQ8VDW0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC22.17■■□□□ 1.14
Ddx39aQ8VDW0 Gm10493-201ENSMUST00000097270 612 ntBASIC22.17■■□□□ 1.14
Ddx39aQ8VDW0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx39aQ8VDW0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx39aQ8VDW0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Ddx39aQ8VDW0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx39aQ8VDW0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC22.16■■□□□ 1.14
Ddx39aQ8VDW0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx39aQ8VDW0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx39aQ8VDW0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx39aQ8VDW0 Gm11421-201ENSMUST00000122124 294 ntBASIC22.16■■□□□ 1.14
Ddx39aQ8VDW0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx39aQ8VDW0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx39aQ8VDW0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx39aQ8VDW0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx39aQ8VDW0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx39aQ8VDW0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx39aQ8VDW0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx39aQ8VDW0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC22.15■■□□□ 1.14
Ddx39aQ8VDW0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC22.15■■□□□ 1.14
Ddx39aQ8VDW0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC22.15■■□□□ 1.14
Ddx39aQ8VDW0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx39aQ8VDW0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx39aQ8VDW0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx39aQ8VDW0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx39aQ8VDW0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC22.15■■□□□ 1.14
Ddx39aQ8VDW0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ddx39aQ8VDW0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ddx39aQ8VDW0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ddx39aQ8VDW0 AC099934.2-201ENSMUST00000196389 70 ntBASIC22.14■■□□□ 1.13
Ddx39aQ8VDW0 AC156953.1-201ENSMUST00000196953 70 ntBASIC22.14■■□□□ 1.13
Ddx39aQ8VDW0 AC157822.2-201ENSMUST00000200291 70 ntBASIC22.14■■□□□ 1.13
Ddx39aQ8VDW0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Ddx39aQ8VDW0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ddx39aQ8VDW0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
Ddx39aQ8VDW0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx39aQ8VDW0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
Ddx39aQ8VDW0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx39aQ8VDW0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx39aQ8VDW0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC22.13■■□□□ 1.13
Ddx39aQ8VDW0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx39aQ8VDW0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx39aQ8VDW0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC22.13■■□□□ 1.13
Ddx39aQ8VDW0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx39aQ8VDW0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx39aQ8VDW0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Ddx39aQ8VDW0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Ddx39aQ8VDW0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx39aQ8VDW0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx39aQ8VDW0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx39aQ8VDW0 AC164629.5-201ENSMUST00000220387 632 ntBASIC22.12■■□□□ 1.13
Ddx39aQ8VDW0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Ddx39aQ8VDW0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx39aQ8VDW0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Ddx39aQ8VDW0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx39aQ8VDW0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Ddx39aQ8VDW0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx39aQ8VDW0 Gm10129-202ENSMUST00000193100 1316 ntBASIC22.11■■□□□ 1.13
Ddx39aQ8VDW0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx39aQ8VDW0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC22.11■■□□□ 1.13
Ddx39aQ8VDW0 Gm26571-201ENSMUST00000181399 666 ntBASIC22.11■■□□□ 1.13
Ddx39aQ8VDW0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx39aQ8VDW0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx39aQ8VDW0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx39aQ8VDW0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx39aQ8VDW0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx39aQ8VDW0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx39aQ8VDW0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx39aQ8VDW0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx39aQ8VDW0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC22.1■■□□□ 1.13
Ddx39aQ8VDW0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx39aQ8VDW0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC22.1■■□□□ 1.13
Ddx39aQ8VDW0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx39aQ8VDW0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx39aQ8VDW0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx39aQ8VDW0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx39aQ8VDW0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC22.09■■□□□ 1.13
Ddx39aQ8VDW0 Gm42642-201ENSMUST00000200683 355 ntBASIC22.09■■□□□ 1.13
Ddx39aQ8VDW0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx39aQ8VDW0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx39aQ8VDW0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx39aQ8VDW0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ddx39aQ8VDW0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC22.08■■□□□ 1.13
Ddx39aQ8VDW0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ddx39aQ8VDW0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ddx39aQ8VDW0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ddx39aQ8VDW0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ddx39aQ8VDW0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ddx39aQ8VDW0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms