Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps39Q8R5L3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Vps39Q8R5L3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps39Q8R5L3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps39Q8R5L3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Vps39Q8R5L3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps39Q8R5L3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Vps39Q8R5L3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps39Q8R5L3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
Vps39Q8R5L3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps39Q8R5L3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps39Q8R5L3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps39Q8R5L3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Vps39Q8R5L3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps39Q8R5L3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vps39Q8R5L3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vps39Q8R5L3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps39Q8R5L3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps39Q8R5L3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vps39Q8R5L3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps39Q8R5L3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps39Q8R5L3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vps39Q8R5L3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps39Q8R5L3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps39Q8R5L3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps39Q8R5L3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Vps39Q8R5L3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Vps39Q8R5L3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vps39Q8R5L3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vps39Q8R5L3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps39Q8R5L3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Vps39Q8R5L3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vps39Q8R5L3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps39Q8R5L3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.9■□□□□ 0.78
Vps39Q8R5L3 Mir6236-201ENSMUST00000184437 123 ntBASIC19.9■□□□□ 0.78
Vps39Q8R5L3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps39Q8R5L3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps39Q8R5L3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps39Q8R5L3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps39Q8R5L3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.89■□□□□ 0.77
Vps39Q8R5L3 Gm43530-201ENSMUST00000195920 274 ntBASIC19.89■□□□□ 0.77
Vps39Q8R5L3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps39Q8R5L3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps39Q8R5L3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps39Q8R5L3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Vps39Q8R5L3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Vps39Q8R5L3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps39Q8R5L3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Vps39Q8R5L3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps39Q8R5L3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps39Q8R5L3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Vps39Q8R5L3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.88■□□□□ 0.77
Vps39Q8R5L3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Vps39Q8R5L3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.88■□□□□ 0.77
Vps39Q8R5L3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps39Q8R5L3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps39Q8R5L3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.88■□□□□ 0.77
Vps39Q8R5L3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Vps39Q8R5L3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps39Q8R5L3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps39Q8R5L3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Vps39Q8R5L3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps39Q8R5L3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.87■□□□□ 0.77
Vps39Q8R5L3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Vps39Q8R5L3 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.87■□□□□ 0.77
Vps39Q8R5L3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps39Q8R5L3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps39Q8R5L3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps39Q8R5L3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.87■□□□□ 0.77
Vps39Q8R5L3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Vps39Q8R5L3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Vps39Q8R5L3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps39Q8R5L3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps39Q8R5L3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps39Q8R5L3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps39Q8R5L3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Vps39Q8R5L3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.86■□□□□ 0.77
Vps39Q8R5L3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps39Q8R5L3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps39Q8R5L3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps39Q8R5L3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Vps39Q8R5L3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Vps39Q8R5L3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Vps39Q8R5L3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Vps39Q8R5L3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps39Q8R5L3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Vps39Q8R5L3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps39Q8R5L3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Vps39Q8R5L3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.84■□□□□ 0.77
Vps39Q8R5L3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Vps39Q8R5L3 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.84■□□□□ 0.77
Vps39Q8R5L3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps39Q8R5L3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps39Q8R5L3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Vps39Q8R5L3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Vps39Q8R5L3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps39Q8R5L3 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.84■□□□□ 0.77
Vps39Q8R5L3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps39Q8R5L3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps39Q8R5L3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms