Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.49■□□□□ 0.87
Sh3kbp1Q8R550 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Sh3kbp1Q8R550 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.49■□□□□ 0.87
Sh3kbp1Q8R550 Gm8493-201ENSMUST00000196881 489 ntBASIC20.49■□□□□ 0.87
Sh3kbp1Q8R550 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.49■□□□□ 0.87
Sh3kbp1Q8R550 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3kbp1Q8R550 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Sh3kbp1Q8R550 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3kbp1Q8R550 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3kbp1Q8R550 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3kbp1Q8R550 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3kbp1Q8R550 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3kbp1Q8R550 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3kbp1Q8R550 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3kbp1Q8R550 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3kbp1Q8R550 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Sh3kbp1Q8R550 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3kbp1Q8R550 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.48■□□□□ 0.87
Sh3kbp1Q8R550 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3kbp1Q8R550 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3kbp1Q8R550 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3kbp1Q8R550 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3kbp1Q8R550 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3kbp1Q8R550 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3kbp1Q8R550 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3kbp1Q8R550 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3kbp1Q8R550 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Sh3kbp1Q8R550 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3kbp1Q8R550 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3kbp1Q8R550 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
Sh3kbp1Q8R550 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3kbp1Q8R550 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3kbp1Q8R550 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.47■□□□□ 0.87
Sh3kbp1Q8R550 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3kbp1Q8R550 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3kbp1Q8R550 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3kbp1Q8R550 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3kbp1Q8R550 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3kbp1Q8R550 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.46■□□□□ 0.87
Sh3kbp1Q8R550 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Sh3kbp1Q8R550 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3kbp1Q8R550 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Sh3kbp1Q8R550 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3kbp1Q8R550 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.45■□□□□ 0.87
Sh3kbp1Q8R550 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Sh3kbp1Q8R550 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.45■□□□□ 0.86
Sh3kbp1Q8R550 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Sh3kbp1Q8R550 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh3kbp1Q8R550 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.45■□□□□ 0.86
Sh3kbp1Q8R550 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh3kbp1Q8R550 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh3kbp1Q8R550 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Sh3kbp1Q8R550 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh3kbp1Q8R550 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.44■□□□□ 0.86
Sh3kbp1Q8R550 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sh3kbp1Q8R550 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sh3kbp1Q8R550 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Sh3kbp1Q8R550 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sh3kbp1Q8R550 Gm12251-201ENSMUST00000117893 792 ntBASIC20.44■□□□□ 0.86
Sh3kbp1Q8R550 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.44■□□□□ 0.86
Sh3kbp1Q8R550 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.44■□□□□ 0.86
Sh3kbp1Q8R550 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sh3kbp1Q8R550 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sh3kbp1Q8R550 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sh3kbp1Q8R550 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Sh3kbp1Q8R550 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sh3kbp1Q8R550 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sh3kbp1Q8R550 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.43■□□□□ 0.86
Sh3kbp1Q8R550 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sh3kbp1Q8R550 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sh3kbp1Q8R550 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.43■□□□□ 0.86
Sh3kbp1Q8R550 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sh3kbp1Q8R550 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.43■□□□□ 0.86
Sh3kbp1Q8R550 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sh3kbp1Q8R550 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sh3kbp1Q8R550 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sh3kbp1Q8R550 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sh3kbp1Q8R550 Iqck-206ENSMUST00000208658 2891 ntBASIC20.42■□□□□ 0.86
Sh3kbp1Q8R550 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sh3kbp1Q8R550 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sh3kbp1Q8R550 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Sh3kbp1Q8R550 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sh3kbp1Q8R550 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sh3kbp1Q8R550 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sh3kbp1Q8R550 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sh3kbp1Q8R550 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sh3kbp1Q8R550 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sh3kbp1Q8R550 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sh3kbp1Q8R550 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sh3kbp1Q8R550 Gm43173-201ENSMUST00000202246 593 ntBASIC20.41■□□□□ 0.86
Sh3kbp1Q8R550 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sh3kbp1Q8R550 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sh3kbp1Q8R550 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Sh3kbp1Q8R550 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sh3kbp1Q8R550 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sh3kbp1Q8R550 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sh3kbp1Q8R550 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sh3kbp1Q8R550 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sh3kbp1Q8R550 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.4■□□□□ 0.86
Sh3kbp1Q8R550 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms