Protein–RNA interactions for Protein: Q8R480

Nup85, Nuclear pore complex protein Nup85, mousemouse

Known RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup85Q8R480 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup85Q8R480 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup85Q8R480 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Nup85Q8R480 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup85Q8R480 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup85Q8R480 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup85Q8R480 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup85Q8R480 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup85Q8R480 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup85Q8R480 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.4■□□□□ 0.86
Nup85Q8R480 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup85Q8R480 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup85Q8R480 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup85Q8R480 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nup85Q8R480 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Nup85Q8R480 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nup85Q8R480 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Nup85Q8R480 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nup85Q8R480 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nup85Q8R480 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nup85Q8R480 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nup85Q8R480 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nup85Q8R480 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nup85Q8R480 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nup85Q8R480 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup85Q8R480 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup85Q8R480 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nup85Q8R480 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nup85Q8R480 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.38■□□□□ 0.85
Nup85Q8R480 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.38■□□□□ 0.85
Nup85Q8R480 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.38■□□□□ 0.85
Nup85Q8R480 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nup85Q8R480 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup85Q8R480 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup85Q8R480 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.37■□□□□ 0.85
Nup85Q8R480 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup85Q8R480 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Nup85Q8R480 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup85Q8R480 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup85Q8R480 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup85Q8R480 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup85Q8R480 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup85Q8R480 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup85Q8R480 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup85Q8R480 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nup85Q8R480 Gm43530-201ENSMUST00000195920 274 ntBASIC20.36■□□□□ 0.85
Nup85Q8R480 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup85Q8R480 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup85Q8R480 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.36■□□□□ 0.85
Nup85Q8R480 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup85Q8R480 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup85Q8R480 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup85Q8R480 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup85Q8R480 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup85Q8R480 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup85Q8R480 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup85Q8R480 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.35■□□□□ 0.85
Nup85Q8R480 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup85Q8R480 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nup85Q8R480 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup85Q8R480 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nup85Q8R480 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup85Q8R480 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nup85Q8R480 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nup85Q8R480 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Nup85Q8R480 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Nup85Q8R480 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup85Q8R480 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup85Q8R480 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Nup85Q8R480 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nup85Q8R480 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup85Q8R480 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup85Q8R480 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup85Q8R480 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup85Q8R480 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.34■□□□□ 0.85
Nup85Q8R480 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.34■□□□□ 0.85
Nup85Q8R480 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup85Q8R480 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nup85Q8R480 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nup85Q8R480 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nup85Q8R480 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nup85Q8R480 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nup85Q8R480 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nup85Q8R480 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nup85Q8R480 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Nup85Q8R480 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
Nup85Q8R480 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nup85Q8R480 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nup85Q8R480 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nup85Q8R480 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nup85Q8R480 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nup85Q8R480 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nup85Q8R480 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Nup85Q8R480 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nup85Q8R480 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nup85Q8R480 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nup85Q8R480 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Nup85Q8R480 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nup85Q8R480 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nup85Q8R480 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms