Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slf1Q8R3P9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slf1Q8R3P9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slf1Q8R3P9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Slf1Q8R3P9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slf1Q8R3P9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slf1Q8R3P9 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.03■□□□□ 0.8
Slf1Q8R3P9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Slf1Q8R3P9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slf1Q8R3P9 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slf1Q8R3P9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slf1Q8R3P9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slf1Q8R3P9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Slf1Q8R3P9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slf1Q8R3P9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.03■□□□□ 0.8
Slf1Q8R3P9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slf1Q8R3P9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.03■□□□□ 0.8
Slf1Q8R3P9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slf1Q8R3P9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slf1Q8R3P9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slf1Q8R3P9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slf1Q8R3P9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
Slf1Q8R3P9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.02■□□□□ 0.8
Slf1Q8R3P9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slf1Q8R3P9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slf1Q8R3P9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Slf1Q8R3P9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slf1Q8R3P9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slf1Q8R3P9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slf1Q8R3P9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Slf1Q8R3P9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Slf1Q8R3P9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Slf1Q8R3P9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Slf1Q8R3P9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Slf1Q8R3P9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Slf1Q8R3P9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slf1Q8R3P9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slf1Q8R3P9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slf1Q8R3P9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slf1Q8R3P9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.01■□□□□ 0.79
Slf1Q8R3P9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slf1Q8R3P9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Slf1Q8R3P9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slf1Q8R3P9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Slf1Q8R3P9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slf1Q8R3P9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slf1Q8R3P9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slf1Q8R3P9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slf1Q8R3P9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Slf1Q8R3P9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Slf1Q8R3P9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Slf1Q8R3P9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20■□□□□ 0.79
Slf1Q8R3P9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20■□□□□ 0.79
Slf1Q8R3P9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Slf1Q8R3P9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slf1Q8R3P9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Slf1Q8R3P9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slf1Q8R3P9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slf1Q8R3P9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slf1Q8R3P9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Slf1Q8R3P9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slf1Q8R3P9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slf1Q8R3P9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.99■□□□□ 0.79
Slf1Q8R3P9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slf1Q8R3P9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slf1Q8R3P9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Slf1Q8R3P9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slf1Q8R3P9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Slf1Q8R3P9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slf1Q8R3P9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Slf1Q8R3P9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.98■□□□□ 0.79
Slf1Q8R3P9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slf1Q8R3P9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slf1Q8R3P9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slf1Q8R3P9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slf1Q8R3P9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slf1Q8R3P9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slf1Q8R3P9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.97■□□□□ 0.79
Slf1Q8R3P9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Slf1Q8R3P9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slf1Q8R3P9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slf1Q8R3P9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Slf1Q8R3P9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
Slf1Q8R3P9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.96■□□□□ 0.79
Slf1Q8R3P9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slf1Q8R3P9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slf1Q8R3P9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.96■□□□□ 0.79
Slf1Q8R3P9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Slf1Q8R3P9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Slf1Q8R3P9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slf1Q8R3P9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Slf1Q8R3P9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Slf1Q8R3P9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slf1Q8R3P9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slf1Q8R3P9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.95■□□□□ 0.78
Slf1Q8R3P9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Slf1Q8R3P9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slf1Q8R3P9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Slf1Q8R3P9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slf1Q8R3P9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms